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SCNpilot_cont_750_bf_scaffold_594

Search features with annotation key words

Displaying items 91-120 of 192 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_594_91
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

91697..92089
DNA (393bp) protein (131aa)
PTS fructose transporter subunit IIA n=1 Tax=Dyella japonica RepID=UPI0002D43917
PTS system fructose IIA component family protein {ECO:0000313|EMBL:AHX14462.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
phosphotransferase system, mannose/fructose-specific component IIA
SCNpilot_cont_750_bf_scaffold_594_92
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

92082..92351
DNA (270bp) protein (90aa)
phosphocarrier protein HPr n=1 Tax=Dyella japonica RepID=UPI0002D524AE
Phosphocarrier protein HPr {ECO:0000313|EMBL:AIF47139.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
phosphotransferase system HPr (HPr) family protein
SCNpilot_cont_750_bf_scaffold_594_93
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

92494..94128
DNA (1635bp) protein (545aa)
phosphoenolpyruvate--protein phosphotransferase (EC:2.7.3.9) rbh
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSD3_9GAMM rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_750_bf_scaffold_594_94
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(94157..94864)
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002FE7CCD rbh
AraC family transcriptional regulator {ECO:0000313|EMBL:AHX14133.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
transcriptional regulator transcription regulator protein rbh
SCNpilot_cont_750_bf_scaffold_594_95
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

94996..95937
DNA (942bp) protein (314aa)
proline racemase (EC:5.1.1.4); K01777 proline racemase [EC:5.1.1.4] rbh
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00036DD879 rbh
Hydroxyproline-2-epimerase {ECO:0000313|EMBL:AIF47554.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
SCNpilot_cont_750_bf_scaffold_594_96
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

95934..97046
DNA (1113bp) protein (371aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002F9D64E rbh
D-amino acid oxidase {ECO:0000313|EMBL:AIF47553.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
fad dependent oxidoreductase oxidoreductase rbh
SCNpilot_cont_750_bf_scaffold_594_97
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

97043..97288
DNA (246bp) protein (82aa)
sarcosine oxidase alpha subunit; K00302 sarcosine oxidase, subunit alpha [EC:1.5.3.1]
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0003066D7C
(2Fe-2S)-binding protein {ECO:0000313|EMBL:AIF47552.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
SCNpilot_cont_750_bf_scaffold_594_98
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

97281..98573
DNA (1293bp) protein (431aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002EFD5E2 rbh
Oxidoreductase {ECO:0000313|EMBL:AIF47551.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
oxidoreductase rbh
SCNpilot_cont_750_bf_scaffold_594_99
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

98570..99475
DNA (906bp) protein (302aa)
dapA2; dihydrodipicolinate synthase (EC:4.2.1.52); K01714 dihydrodipicolinate synthase [EC:4.2.1.52] rbh
dihydrodipicolinate synthetase n=1 Tax=Dyella japonica RepID=UPI0002F6BC69 rbh
Dihydrodipicolinate synthetase {ECO:0000313|EMBL:AHX14138.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
SCNpilot_cont_750_bf_scaffold_594_100
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

99477..101075
DNA (1599bp) protein (533aa)
aldehyde dehydrogenase (EC:1.2.1.-); K14519 NADP-dependent aldehyde dehydrogenase [EC:1.2.1.4] rbh
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002F081B6 rbh
Ketoglutarate semialdehyde dehydrogenase {ECO:0000313|EMBL:AHX14139.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
SCNpilot_cont_750_bf_scaffold_594_101
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

101072..102280
DNA (1209bp) protein (403aa)
Xaa-Pro aminopeptidase; K01271 Xaa-Pro dipeptidase [EC:3.4.13.9] rbh
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI000310638B rbh
X-Pro dipeptidase {ECO:0000313|EMBL:AIF47548.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
SCNpilot_cont_750_bf_scaffold_594_102
Collimonas arenae, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

102330..104108
DNA (1779bp) protein (593aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00031A4C6F rbh
Uncharacterized protein {ECO:0000313|EMBL:AIY41629.1}; TaxID=279058 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas arenae.;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_594_103
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

104192..105760
DNA (1569bp) protein (523aa)
Amino acid permease n=1 Tax=Xanthomonas hortorum pv. carotae str. M081 RepID=V7ZCQ4_9XANT rbh
Cupriavidus basilensis strain 4G11 chromosome secondary, complete sequence {ECO:0000313|EMBL:AJG24837.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis.;"
amino acid permease rbh
SCNpilot_cont_750_bf_scaffold_594_104
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

105802..108174
DNA (2373bp) protein (791aa)
Uncharacterized protein n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7HE09_XANCT rbh
Uncharacterized protein {ECO:0000313|EMBL:ELQ16264.1}; TaxID=1205753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens DAR61454.;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_594_105
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

108212..109429
DNA (1218bp) protein (406aa)
Alpha-galactosidase {ECO:0000256|RuleBase:RU361168}; EC=3.2.1.22 {ECO:0000256|RuleBase:RU361168};; Melibiase {ECO:0000256|RuleBase:RU361168}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
alpha-galactosidase; K07407 alpha-galactosidase [EC:3.2.1.22] rbh
Alpha-galactosidase (Melibiase) (Alpha-D-galactoside galactohydrolase) n=1 Tax=mine drainage metagenome RepID=E6QNY8_9ZZZZ rbh
SCNpilot_cont_750_bf_scaffold_594_106
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

109672..111636
DNA (1965bp) protein (655aa)
Uncharacterized protein n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L5K1_FRAAD rbh
Uncharacterized protein {ECO:0000313|EMBL:AHX14144.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein; K09955 hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_594_107
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

111871..114774
DNA (2904bp) protein (968aa)
Outer membrane cobalamin receptor protein n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L5K0_FRAAD rbh
Outer membrane cobalamin receptor protein {ECO:0000313|EMBL:AFC85801.1}; Flags: Precursor;; TaxID=767434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Frateuria.;" source="Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB; 13370) (Acetobacter aurantius).;"
outer membrane cobalamin receptor protein rbh
SCNpilot_cont_750_bf_scaffold_594_108
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(114916..115803)
DNA (888bp) protein (296aa)
Transcriptional regulator n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSD2_9GAMM rbh
Transcriptional regulator {ECO:0000313|EMBL:EIM02374.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
transcriptional regulator rbh
SCNpilot_cont_750_bf_scaffold_594_109
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

115896..116921
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSD1_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIM02373.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_594_110
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(116971..117327)
DNA (357bp) protein (119aa)
RNA signal recognition particle 4.5S RNA n=1 Tax=Dyella japonica RepID=UPI0003075F21
RNA signal recognition particle 4.5S RNA {ECO:0000313|EMBL:AIF45988.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_594_111
Pseudoalteromonas piscicida, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(117472..117999)
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=Vibrio cyclitrophicus RepID=UPI00029A0115
Uncharacterized protein {ECO:0000313|EMBL:ERG33431.1}; TaxID=1117317 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas piscicida JCM 20779.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_594_112
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(118113..118811)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSC8_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIM02370.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
universal bacterial protein YeaZ rbh
SCNpilot_cont_750_bf_scaffold_594_113
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(118808..120154)
DNA (1347bp) protein (449aa)
Inner membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WR15_9GAMM rbh
Inner membrane protein involved in colicin E2 resistance rbh
Inner membrane protein involved in colicin E2 resistance {ECO:0000313|EMBL:AGG90221.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_bf_scaffold_594_114
Alcanivorax dieselolei, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(120248..121384)
DNA (1137bp) protein (379aa)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01559, ECO:0000256|SAAS:SAAS00019080}; EC=1.1.-.- {ECO:0000256|HAMAP-Rule:MF_01559, ECO:0000256|SAAS:SAAS00019079};; TaxID=930169 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5).;"
L-lactate dehydrogenase [cytochrome] n=1 Tax=Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5) RepID=K0CAK2_ALCDB rbh
L-lactate dehydrogenase rbh
SCNpilot_cont_750_bf_scaffold_594_115
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(121431..122195)
DNA (765bp) protein (255aa)
ABC transporter substrate-binding protein n=1 Tax=Nevskia ramosa RepID=UPI0003B5FCC2 rbh
Periplasmic binding protein {ECO:0000313|EMBL:EIT70015.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
periplasmic binding protein; K02016 iron complex transport system substrate-binding protein
SCNpilot_cont_750_bf_scaffold_594_116

Not on your lists

comp(122229..122627)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PLA9_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBH95710.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_594_117
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(122624..124585)
DNA (1962bp) protein (654aa)
DNA helicase, Rad3 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4R0_9GAMM rbh
DNA helicase, Rad3 {ECO:0000313|EMBL:EIL94451.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
DNA helicase, Rad3 rbh
SCNpilot_cont_750_bf_scaffold_594_118
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(124668..125201)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VKK0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AHX14477.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_594_119
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(125204..127564)
DNA (2361bp) protein (787aa)
Penicillin-binding protein 1B n=1 Tax=Rhodanobacter sp. 115 RepID=I4WAX8_9GAMM rbh
Penicillin-binding protein 1B {ECO:0000256|PIRNR:PIRNR002799}; Short=PBP-1b {ECO:0000256|PIRNR:PIRNR002799};; Short=PBP1b {ECO:0000256|PIRNR:PIRNR002799};; Murein polymerase {ECO:0000256|PIRNR:PIRNR002799}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
penicillin-binding protein 1B rbh
SCNpilot_cont_750_bf_scaffold_594_120
Thiocystis violascens, Thiocystis, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(127728..128600)
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00035DEB91
methylase involved in ubiquinone/menaquinone biosynthesis
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:AFL74601.1}; TaxID=765911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocystis.;" source="Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) (Chromatium; violascens).;"
Displaying items 91-120 of 192 in total

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