name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_750_bf_scaffold_594_61
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(66305..66637)
|
Putative methylated DNA-protein cysteine methyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NGW1_9GAMM
putative methylated DNA-protein cysteine methyltransferase
Cysteine methyltransferase {ECO:0000313|EMBL:AIF47165.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
|
|
SCNpilot_cont_750_bf_scaffold_594_62
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
66718..67122
|
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0003070B47
Uncharacterized protein {ECO:0000313|EMBL:AIF47164.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
hypothetical protein
|
|
SCNpilot_cont_750_bf_scaffold_594_63
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(67119..68243)
|
Phosphate/sulfate permease n=1 Tax=Rhodanobacter sp. 115 RepID=I4W1P4_9GAMM
rbh
Phosphate/sulfate permease {ECO:0000313|EMBL:EIL93385.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
phosphate/sulfate permease
rbh
|
|
SCNpilot_cont_750_bf_scaffold_594_64
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(68254..68883)
|
pit accessory protein n=1 Tax=Dyella japonica RepID=UPI0003028401
rbh
Pit accessory protein {ECO:0000313|EMBL:AIF47162.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
phosphate transport regulator related to PhoU
rbh
|
|
SCNpilot_cont_750_bf_scaffold_594_65
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
69063..70391
|
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WQY3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL87762.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
CBS domain-containing protein
|
|
SCNpilot_cont_750_bf_scaffold_594_66
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(70491..71249)
|
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ {ECO:0000256|RuleBase:RU362024}; EC=2.1.1.200 {ECO:0000256|RuleBase:RU362024};; tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase {ECO:0000256|RuleBase:RU362024}; tRNA Cm32/Um32 methyltransferase {ECO:0000256|RuleBase:RU362024}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
tRNA/rRNA methyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRP1_9GAMM
rbh
RNA methyltransferase, TrmH family, group 1
rbh
|
|
SCNpilot_cont_750_bf_scaffold_594_67
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
71360..72163
|
Inositol monophosphatase/fructose-1,6-bisphosphatase family protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W1P9_9GAMM
rbh
Inositol monophosphatase/fructose-1,6-bisphosphatase family protein {ECO:0000313|EMBL:EIL93390.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
inositol monophosphatase/fructose-1,6-bisphosphatase family protein
|
|
SCNpilot_cont_750_bf_scaffold_594_68
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(72177..72431)
|
hypothetical protein n=1 Tax=Xanthomonas arboricola RepID=UPI000375858C
Strain LMCP11 contig_6, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ28724.1}; TaxID=339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris.;"
hypothetical protein
|
|
SCNpilot_cont_750_bf_scaffold_594_69
Gynuella sunshinyii, Gynuella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(72663..73178)
|
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VPT4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AJQ96024.1}; TaxID=1445510 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillales; Gynuella.;" source="Gynuella sunshinyii YC6258.;"
hypothetical protein
|
|
SCNpilot_cont_750_bf_scaffold_594_70
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(73180..73887)
|
Putative permease n=1 Tax=Rhodanobacter sp. 115 RepID=I4W1Q0_9GAMM
Putative permease {ECO:0000313|EMBL:EIL93391.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
regulatory inactivation of DnaA Hda protein
|
|
SCNpilot_cont_750_bf_scaffold_594_71
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(73884..75077)
|
Putative permease n=1 Tax=Rhodanobacter denitrificans RepID=M4NKI4_9GAMM
rbh
Membrane protein {ECO:0000313|EMBL:AHX14446.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
putative permease
rbh
|
|
SCNpilot_cont_750_bf_scaffold_594_72
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(75103..76098)
|
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WQY8_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90194.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
SCNpilot_cont_750_bf_scaffold_594_73
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
76249..77283
|
phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1)
rbh
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Rhodanobacter denitrificans RepID=M4NGW8_9GAMM
rbh
|
|
SCNpilot_cont_750_bf_scaffold_594_74
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
77518..78177
|
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Phosphoribosylformylglycinamidine synthase, clade II n=1 Tax=Rhodanobacter sp. 115 RepID=I4WSS1_9GAMM
rbh
|
|
SCNpilot_cont_750_bf_scaffold_594_75
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
78213..78917
|
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4U4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94485.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Protein of unknown function (DUF3108)
|
|
SCNpilot_cont_750_bf_scaffold_594_76
unknown
|
Not on your lists |
comp(78921..79241)
|
This feature has no annotations |
|
SCNpilot_cont_750_bf_scaffold_594_77
unknown
|
Not on your lists |
comp(79238..79588)
|
This feature has no annotations |
|
SCNpilot_cont_750_bf_scaffold_594_78
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(79616..80875)
|
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VKN0_9GAMM
rbh
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
rbh
|
|
SCNpilot_cont_750_bf_scaffold_594_79
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(80964..81206)
|
BolA superfamily transcriptional regulator n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSE5_9GAMM
putative transcriptional regulator, BolA superfamily
BolA superfamily transcriptional regulator {ECO:0000313|EMBL:EIM02387.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
|
|
SCNpilot_cont_750_bf_scaffold_594_80
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
81352..82362
|
Arabinose 5-phosphate isomerase {ECO:0000256|PIRNR:PIRNR004692}; Short=API {ECO:0000256|PIRNR:PIRNR004692};; EC=5.3.1.13 {ECO:0000256|PIRNR:PIRNR004692};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Arabinose 5-phosphate isomerase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VKN2_9GAMM
rbh
KpsF/GutQ family protein
rbh
|
|
SCNpilot_cont_750_bf_scaffold_594_81
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
82431..82979
|
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase n=1 Tax=Rhodanobacter denitrificans RepID=I4WQZ9_9GAMM
rbh
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family
rbh
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family {ECO:0000313|EMBL:AGG90205.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
SCNpilot_cont_750_bf_scaffold_594_82
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
82976..83584
|
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VKN4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL87775.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
|
|
SCNpilot_cont_750_bf_scaffold_594_83
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
83541..84095
|
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002F549F9
Sugar transporter {ECO:0000313|EMBL:AIF47146.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
lipopolysaccharide transport periplasmic protein LptA
|
|
SCNpilot_cont_750_bf_scaffold_594_84
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
84098..84817
|
ABC transporter ATPase n=1 Tax=Rhodanobacter denitrificans RepID=I4WR02_9GAMM
rbh
ABC-type (unclassified) transport system, ATPase component
rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
|
|
SCNpilot_cont_750_bf_scaffold_594_85
unknown
|
Not on your lists |
85106..85441
|
This feature has no annotations |
|
SCNpilot_cont_750_bf_scaffold_594_86
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
85503..87635
|
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00030407F1
rbh
TonB-dependent receptor {ECO:0000313|EMBL:AIF47605.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
TonB-dependent copper receptor; K02014 iron complex outermembrane recepter protein
rbh
|
|
SCNpilot_cont_750_bf_scaffold_594_87
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
87744..89210
|
RNA polymerase sigma-54 factor n=1 Tax=Rhodanobacter denitrificans RepID=I4WR03_9GAMM
rbh
RNA polymerase, sigma 54 subunit, RpoN/SigL
rbh
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
SCNpilot_cont_750_bf_scaffold_594_88
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
89346..89669
|
Ribosomal subunit interface protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W140_9GAMM
Ribosomal subunit interface protein {ECO:0000313|EMBL:EIL93181.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
ribosomal subunit interface protein
|
|
SCNpilot_cont_750_bf_scaffold_594_89
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
89800..90750
|
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058427};; EC=2.7.4.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058435};; HPr(Ser) kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathi
serine kinase of the HPr protein, regulates carbohydrate metabolism (EC:2.7.1.-)
rbh
HPr kinase/phosphorylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4T4_9GAMM
rbh
|
|
SCNpilot_cont_750_bf_scaffold_594_90
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
90755..91657
|
UPF0042 nucleotide-binding protein UUC_10667 n=1 Tax=Rhodanobacter denitrificans RepID=I4WR06_9GAMM
rbh
putative P-loop-containing kinase
rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
|