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SCNpilot_cont_750_bf_scaffold_542_1

Organism: SCNPILOT_CONT_300_BF_Nitrobacter_62_24

partial RP 29 / 55 BSCG 31 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: 323..988

Top 3 Functional Annotations

Value Algorithm Source
Putative TetR family transcriptional regulator n=1 Tax=Pseudomonas sp. CF149 RepID=S6HVG7_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 53.4
  • Coverage: 206.0
  • Bit_score: 234
  • Evalue 1.20e-58
Putative TetR family transcriptional regulator {ECO:0000313|EMBL:EPJ92812.1}; TaxID=911239 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CF149.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.4
  • Coverage: 206.0
  • Bit_score: 234
  • Evalue 1.60e-58
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 53.4
  • Coverage: 208.0
  • Bit_score: 227
  • Evalue 3.40e-57

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Taxonomy

Pseudomonas sp. CF149 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 666
ATGCGAGGTCCCACTAAGAACAGCACCACGCGAAACAGAAACAGAGGTCGCCCGCGGACATTCGATCGCGATGTCGCGTTGGCACGGGCTCTGAATGTCTTCTGGCTGAGAGGCTATGAGCCTGCATCCATCGCCGAGCTCTGTGCGGCGATGGAAATAAATCCGCCGAGCCTCTACGCCGCTTTTGGCAACAAGGCGCAACTCTTCCTGGAGGCCGCCAGACATTACAAGAATTTCTACTGGAGTGCCGCCTGGGATCGACTGGCGGCAAATCCGGATATTCACGAGGGCATGGCTGGCTTTTTCCACGAGGCCGCCAGCATCCTGACCTCGCAGGACGCGCCGTGCGGATGCCTGATCATTCTGGCCGCCACGAACGTCTCTGCCGAGGGGCAGACCGTCAACGACGCGCTCAAGGAATTACGCGAAGAAGGCCTTAATTGCTTTCTGACCCGCATCAAGCGGGCGATCGTCGACGGACAGTTGCTCCCCGACACGGATGCCATTGCCATGGCTGCGGCGTTCAACACCATGCTGGACGGCATGTCTCTGCGGGCGCGGGACGGCGCATCCCGAAGCGACCTTGAGCAAGTCGGCACTATTGCAATGAGCATGTTTCGCAGCGCCATTCCGTCATCATCCGATCCACTAGGAGTTCAGCCATGA
PROTEIN sequence
Length: 222
MRGPTKNSTTRNRNRGRPRTFDRDVALARALNVFWLRGYEPASIAELCAAMEINPPSLYAAFGNKAQLFLEAARHYKNFYWSAAWDRLAANPDIHEGMAGFFHEAASILTSQDAPCGCLIILAATNVSAEGQTVNDALKELREEGLNCFLTRIKRAIVDGQLLPDTDAIAMAAAFNTMLDGMSLRARDGASRSDLEQVGTIAMSMFRSAIPSSSDPLGVQP*