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SCNpilot_cont_750_bf_scaffold_542_27

Organism: SCNPILOT_CONT_300_BF_Nitrobacter_62_24

partial RP 29 / 55 BSCG 31 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: comp(27599..28507)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Ochrobactrum sp. EGD-AQ16 RepID=U1XKD8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 88.7
  • Coverage: 302.0
  • Bit_score: 544
  • Evalue 9.30e-152
  • rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:ERI15380.1}; TaxID=1390361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. EGD-AQ16.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.7
  • Coverage: 302.0
  • Bit_score: 544
  • Evalue 1.30e-151
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 77.8
  • Coverage: 302.0
  • Bit_score: 490
  • Evalue 3.90e-136
  • rbh

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Taxonomy

Ochrobactrum sp. EGD-AQ16 → Ochrobactrum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 909
ATGCAAACAAACCGTGCCGACGTCGCCGATTTAACCTACTTTCTGGCGATCGCAAGGCATCGAAGCTTTAGCCGCGCTGCAATCGAAATCGGCGTGAGCGCCTCTGCCTTGAGCCATGCACTCAAAGGCTTGGAGGGCAGGCTAGGTATTCGGCTTCTCAATCGGACGACAAAGAGTGTCACTCTCACGGCCGCCGGAGAGGCTCTTGCCGTTGCGATCGGAGAACCATTCGAGCGGATCGACGTTGCGTTGGAAACGCTGAACCGTTTTCGCGACGCTCCATCGGGCCGAATCCGGCTGAACGTCGCCGTTGAGGCAGCCAATCTGCTCTTGGCCCCGGTCTTGCCCGTGTTCATGGAGCGTTATCCTGACATCGAGATCGATATCGTTGCCAACAATCGCATGGTGGATATGACGGACGCAGGTTTTGATGCCGGCATCCGATATGGGGGCACGGTGCCGGAGGACATGATTGCGCAAAGGCTGTCGGCGGATGTGCGCTGGGTGGTAGCGGGTTCGCCTGAATACCTAGATCGGTTCGGCACGCCGGAACATCCCAACGATCTGCTTCAGCACCGATGCATCAGCAACCGGCTCGGAGATGACCGTGTCTATCGATGGGAGTTCGAGCACGATGGAGAGGAATTGCAGGTGACGGTGCCGACATCGATCACGGTCGATCAGGCGGAGACGGGGCTTGTTGCCGTGCTCCGCGGCGGCGGTCTCATGTACTTTCCTGAACCCCTCGTTGCCCCGTATGTTTCGGACGGACGACTGCGTCTGGTGCTCGTGGACTGGGCGTCGCGGGGAGACGGCTTTCACATCTATTATTCGAGCCGTCGACAAGTCCCGACCGGGCTGCGTCTTCTGATCGACCTCGTTCGCGAGCTGCGTCCGATAGGACTCTAG
PROTEIN sequence
Length: 303
MQTNRADVADLTYFLAIARHRSFSRAAIEIGVSASALSHALKGLEGRLGIRLLNRTTKSVTLTAAGEALAVAIGEPFERIDVALETLNRFRDAPSGRIRLNVAVEAANLLLAPVLPVFMERYPDIEIDIVANNRMVDMTDAGFDAGIRYGGTVPEDMIAQRLSADVRWVVAGSPEYLDRFGTPEHPNDLLQHRCISNRLGDDRVYRWEFEHDGEELQVTVPTSITVDQAETGLVAVLRGGGLMYFPEPLVAPYVSDGRLRLVLVDWASRGDGFHIYYSSRRQVPTGLRLLIDLVRELRPIGL*