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SCNpilot_cont_750_bf_scaffold_1736_17

Organism: SCNPILOT_CONT_300_BF_Nitrobacter_62_24

partial RP 29 / 55 BSCG 31 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: comp(27367..27675)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoH n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QJG9_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 92.1
  • Coverage: 101.0
  • Bit_score: 186
  • Evalue 1.70e-44
RNA polymerase factor sigma-32; K03089 RNA polymerase sigma-32 factor similarity KEGG
DB: KEGG
  • Identity: 92.1
  • Coverage: 101.0
  • Bit_score: 186
  • Evalue 5.30e-45
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.1
  • Coverage: 101.0
  • Bit_score: 186
  • Evalue 2.40e-44

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Taxonomy

Nitrobacter hamburgensis → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 309
GAATGGCAGGACTGGCTGGTCGATCACTCGCCCACCCAGGAAGCCGTCATGGCCGAGTACGAGGAGTTCGATCATCGTCGTCAGGCGTTGAGCGGCGCCATGGACGTGCTCAATCCGCGTGAACGTCGCATCTTCGAGGCACGGCGCCTCGCCGATGAACCGATGACGCTGGAGGATCTCGCCGCCGAATTCAACGTATCCCGCGAACGCGTGCGCCAGATCGAGGTTCGCGCCTTCGAGAAGGTACAATCGGCGGTGAAAGCCGCGATCGCACGGCAGGAGCAAGCCGCACTCGAAGCCGCTCGCTGA
PROTEIN sequence
Length: 103
EWQDWLVDHSPTQEAVMAEYEEFDHRRQALSGAMDVLNPRERRIFEARRLADEPMTLEDLAAEFNVSRERVRQIEVRAFEKVQSAVKAAIARQEQAALEAAR*