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SCNpilot_cont_750_bf_scaffold_2053_5

Organism: SCNPILOT_CONT_300_BF_Nitrobacter_62_24

partial RP 29 / 55 BSCG 31 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: comp(3497..3877)

Top 3 Functional Annotations

Value Algorithm Source
XRE family transcriptional regulator n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D1S9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 90.5
  • Coverage: 126.0
  • Bit_score: 232
  • Evalue 3.30e-58
XRE family transcriptional regulator {ECO:0000313|EMBL:EYR78513.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.5
  • Coverage: 126.0
  • Bit_score: 232
  • Evalue 4.60e-58
transcriptional regulator helix turn helix domain similarity KEGG
DB: KEGG
  • Identity: 84.9
  • Coverage: 126.0
  • Bit_score: 218
  • Evalue 9.10e-55

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 381
ATGGCAAATAACCTGAAGCCGATCCGCACGAAGGCGGATTACGAAGCGGCGCTTGCCGAGGTCGAGCGGCTGTGGGGCGCGAAGCGCGGCACGCCGAAGGGCGACCGGCTCGACGTGCTGGCCACGTTGATCGATGTTTACGAGACCAAACATTATCCGATGGATCCGCCTGACCCGGTGGAAGCGATCCGCTTCCGCATGGAGCAACAGGGGCTGACGCGGAAAGACCTTGAGCCGATGATCGGGCCGCGCAACCGGGTGGCGGACGTCCTGAATCGCAAGCGGAGCCTGTCGATCGAGATGATCCGGCAGTTGCATGATCGTCTCGGGATCTCGGCCGAGGTTCTGATCCGGCCTAGCCGACTCGACAAGATTGCCTGA
PROTEIN sequence
Length: 127
MANNLKPIRTKADYEAALAEVERLWGAKRGTPKGDRLDVLATLIDVYETKHYPMDPPDPVEAIRFRMEQQGLTRKDLEPMIGPRNRVADVLNRKRSLSIEMIRQLHDRLGISAEVLIRPSRLDKIA*