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SCNpilot_cont_750_bf_scaffold_512

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_512_1
unknown

Not on your lists

comp(2..187)
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_512_2
Trebouxia aggregata, Trebouxia, Microthamniales, Trebouxiophyceae, Chlorophyta, Viridiplantae

Not on your lists


comp(209..508)
DNA (300bp) protein (100aa)
Ribosomal protein S14 n=1 Tax=Trebouxia aggregata RepID=G8XP62_9CHLO
Ribosomal protein S14 {ECO:0000313|EMBL:ABX82545.1}; TaxID=160068 species="Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Microthamniales; Trebouxia.;" source="Trebouxia aggregata.;"
30S ribosomal protein S14, putative; K02954 small subunit ribosomal protein S14
SCNpilot_cont_750_bf_scaffold_512_3
unknown

Not on your lists

comp(521..1111)
DNA (591bp) protein (197aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_512_4
uncultured Desulfobacterium sp., Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(1121..1489)
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YG79_9DELT
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=201089 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium; environmental samples.;" source="uncultured Desulfobacterium sp.;"
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14
SCNpilot_cont_750_bf_scaffold_512_5
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(1464..1904)
DNA (441bp) protein (147aa)
50S ribosomal protein L16 n=3 Tax=Cycloclasticus RepID=K0C7U5_CYCSP
LSU ribosomal protein L16p (L10e)
Tax=RBG_16_Gamma2_60_9_curated
SCNpilot_cont_750_bf_scaffold_512_6
Polysphondylium pallidum, Polysphondylium, Dictyosteliida, Eukaryota

Not on your lists


comp(1912..3933)
DNA (2022bp) protein (674aa)
Ribosomal protein S3 n=1 Tax=Polysphondylium pallidum RepID=B2XX48_POLPA
Ribosomal protein S3 {ECO:0000313|EMBL:ABX45170.1}; TaxID=13642 species="Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Polysphondylium.;" source="Polysphondylium pallidum (Cellular slime mold).;"
30S ribosomal protein S3; K02982 small subunit ribosomal protein S3
SCNpilot_cont_750_bf_scaffold_512_7
Reclinomonas americana, Reclinomonas, Eukaryota

Not on your lists


comp(3955..4722)
DNA (768bp) protein (256aa)
60S ribosomal protein L2, mitochondrial n=1 Tax=Reclinomonas americana RepID=RM02_RECAM
60S ribosomal protein L2, mitochondrial; TaxID=48483 species="Eukaryota; Jakobida; Histionidae; Reclinomonas.;" source="Reclinomonas americana.;"
50S ribosomal protein L2
SCNpilot_cont_750_bf_scaffold_512_8
R_OP11_Levybacteria_37_10, Levybacteria, Microgenomates, Bacteria

Not on your lists


comp(4736..6448)
DNA (1713bp) protein (571aa)
30S ribosomal protein S7 n=1 Tax=Mycoplasma iowae 695 RepID=G4ENC3_MYCIO
Tax=RIFCSPHIGHO2_02_FULL_OP11_Levybacteria_37_10_curated
SCNpilot_cont_750_bf_scaffold_512_9
Rhodosporidium toruloides, Rhodosporidium, Sporidiobolales, Microbotryomycetes, Basidiomycota, Fungi

Not on your lists


comp(6489..6878)
DNA (390bp) protein (130aa)
30S ribosomal protein s12 n=1 Tax=Rhodosporidium toruloides (strain NP11) RepID=M7XQ42_RHOT1
30S ribosomal protein s12 {ECO:0000313|EMBL:EMS22318.1}; TaxID=1130832 species="Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; Microbotryomycetes; Sporidiobolales; Rhodosporidium.;" source="Rhodosporidium toruloides (strain NP11) (Yeast) (Rhodotorula; gracilis).;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_512_10
unknown

Not on your lists

comp(6865..7380)
DNA (516bp) protein (172aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_512_11
Aquifex aeolicus, Aquifex, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists


comp(7384..7812)
DNA (429bp) protein (143aa)
50S ribosomal protein L11 n=1 Tax=Aquifex aeolicus (strain VF5) RepID=RL11_AQUAE
50S ribosomal protein L11
50S ribosomal protein L11 {ECO:0000255|HAMAP-Rule:MF_00736}; TaxID=224324 species="Bacteria; Aquificae; Aquificales; Aquificaceae; Aquifex.;" source="Aquifex aeolicus (strain VF5).;"
SCNpilot_cont_750_bf_scaffold_512_12
Vermamoeba vermiformis, Vermamoeba, Eukaryota

Not on your lists

comp(7822..8973)
DNA (1152bp) protein (384aa)
Cytochrome b n=1 Tax=Reclinomonas americana RepID=O21291_RECAM rbh
Cytochrome b {ECO:0000256|RuleBase:RU000300}; TaxID=5778 species="Eukaryota; Amoebozoa; Tubulinea; Euamoebida; Tubulinida; Hartmannellidae; Vermamoeba.;" source="Vermamoeba vermiformis (Amoeba) (Hartmannella vermiformis).;"
cob; apocytochrome b rbh
SCNpilot_cont_750_bf_scaffold_512_13
Malawimonas sp. strain 249, Malawimonas, Eukaryota

Not on your lists

comp(9498..9761)
DNA (264bp) protein (88aa)
ATP synthase protein 9; K02128 F-type H+-transporting ATPase subunit c [EC:3.6.3.14]
ATP synthase subunit 9, mitochondrial n=5 Tax=Bangiaceae RepID=I0B6X6_PYRHA
ATP synthase subunit 9, mitochondrial {ECO:0000256|RuleBase:RU003575}; TaxID=1603548 species="Eukaryota; Malawimonadidae; Malawimonas.;" source="Malawimonas sp. strain 249.;"
SCNpilot_cont_750_bf_scaffold_512_14
Peptoniphilus sp. BV3AC2, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


9846..10091
DNA (246bp) protein (82aa)
30S ribosomal protein S16 n=2 Tax=Peptoniphilus RepID=E0NMR8_9FIRM
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=1111133 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. BV3AC2.;"
SCNpilot_cont_750_bf_scaffold_512_15
unknown

Not on your lists

10084..10314
DNA (231bp) protein (77aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_512_16
unknown

Not on your lists

comp(10400..12385)
DNA (1986bp) protein (662aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_512_17
unknown

Not on your lists

comp(12585..13646)
DNA (1062bp) protein (354aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_512_18
Roya obtusa, Roya, Zygnematales, Zygnemophyceae, Streptophyta, Viridiplantae

Not on your lists

comp(13675..15453)
DNA (1779bp) protein (593aa)
NADH-ubiquinone oxidoreductase chain 2; K03879 NADH-ubiquinone oxidoreductase chain 2 [EC:1.6.5.3]
NADH dehydrogenase subunit 2 n=1 Tax=Roya obtusa RepID=U5YEE5_9VIRI
NADH dehydrogenase subunit 2 {ECO:0000313|EMBL:AGZ90373.1}; TaxID=104537 species="Eukaryota; Viridiplantae; Streptophyta; Zygnemophyceae; Zygnematales; Mesotaeniaceae; Roya.;" source="Roya obtusa.;"
SCNpilot_cont_750_bf_scaffold_512_19
Malawimonas californiana, Malawimonas, Eukaryota

Not on your lists

comp(15454..17205)
DNA (1752bp) protein (584aa)
NADH-ubiquinone oxidoreductase chain 4 {ECO:0000256|RuleBase:RU003297}; EC=1.6.5.3 {ECO:0000256|RuleBase:RU003297};; TaxID=221722 species="Eukaryota; Malawimonadidae; Malawimonas.;" source="Malawimonas californiana (Flagellated protozoan).;"
nad4; NADH dehydrogenase subunit 4; K03881 NADH-ubiquinone oxidoreductase chain 4 [EC:1.6.5.3]
NADH dehydrogenase subunit 4 n=1 Tax=Roya obtusa RepID=U5YGV7_9VIRI rbh
SCNpilot_cont_750_bf_scaffold_512_20
Reclinomonas americana, Reclinomonas, Eukaryota

Not on your lists

comp(17355..19229)
DNA (1875bp) protein (625aa)
NADH-ubiquinone oxidoreductase chain 5 {ECO:0000256|RuleBase:RU003404, ECO:0000256|SAAS:SAAS00061106}; EC=1.6.5.3 {ECO:0000256|RuleBase:RU003404, ECO:0000256|SAAS:SAAS00061108};; TaxID=1295594 species="Eukaryota; Jakobida; Histionidae; Reclinomonas.;" source="Reclinomonas americana ATCC 50283.;"
NADH-ubiquinone oxidoreductase chain 5 n=1 Tax=Reclinomonas americana ATCC 50283 RepID=M4QAH2_RECAM rbh
nad5; NADH dehydrogenase subunit 5 rbh
SCNpilot_cont_750_bf_scaffold_512_21
Chlorella variabilis, Chlorella, Chlorellales, Trebouxiophyceae, Chlorophyta, Viridiplantae

Not on your lists

comp(19243..19554)
DNA (312bp) protein (104aa)
Nad4L_1; K03882 NADH-ubiquinone oxidoreductase chain 4L [EC:1.6.5.3]
NADH dehydrogenase subunit 4L n=1 Tax=Chlorella sp. ArM0029B RepID=U5U5M9_9CHLO
NADH dehydrogenase subunit 4L {ECO:0000313|EMBL:AIU38973.1}; TaxID=554065 species="Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellaceae; Chlorella.;" source="Chlorella variabilis (Green alga).;"
SCNpilot_cont_750_bf_scaffold_512_22
Chlorokybus atmophyticus, Chlorokybus, Chlorokybales, Chlorokybophyceae, Streptophyta, Viridiplantae

Not on your lists

comp(19671..20552)
DNA (882bp) protein (294aa)
Cytochrome c oxidase subunit 2 n=1 Tax=Chlorokybus atmophyticus RepID=A6YEA4_CHLAT rbh
Cytochrome c oxidase subunit 2 {ECO:0000256|RuleBase:RU000457}; TaxID=3144 species="Eukaryota; Viridiplantae; Streptophyta; Chlorokybophyceae; Chlorokybales; Chlorokybaceae; Chlorokybus.;" source="Chlorokybus atmophyticus (Soil alga).;"
cytochrome c oxidase polypeptide II; K02261 cytochrome c oxidase subunit 2
SCNpilot_cont_750_bf_scaffold_512_23
Thecamonas trahens, Thecamonas, Eukaryota

Not on your lists

comp(20588..21193)
DNA (606bp) protein (202aa)
NADH-ubiquinone oxidoreductase chain 6 {ECO:0000256|RuleBase:RU004430}; EC=1.6.5.3 {ECO:0000256|RuleBase:RU004430};; TaxID=529818 species="Eukaryota; Apusozoa; Apusomonadidae; Thecamonas.;" source="Thecamonas trahens (Flagellate) (Amastigomonas trahens).;"
nad6; NADH dehydrogenase subunit 6; K03884 NADH-ubiquinone oxidoreductase chain 6 [EC:1.6.5.3]
NADH-ubiquinone oxidoreductase chain 6 n=1 Tax=Andalucia godoyi RepID=M4QCS5_9EUKA
SCNpilot_cont_750_bf_scaffold_512_24
Ixodes ricinus, Ixodes, Ixodida, Acari, Arthropoda, Metazoa

Not on your lists

comp(24009..24614)
DNA (606bp) protein (202aa)
Putative conserved plasma membrane protein (Fragment) n=1 Tax=Ixodes ricinus RepID=V5HZF5_IXORI
Putative conserved plasma membrane protein {ECO:0000313|EMBL:JAB84314.1}; Flags: Fragment;; TaxID=34613 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Ixodinae; Ixodes.;" source="Ixodes ricinus (Common tick).;"
SCNpilot_cont_750_bf_scaffold_512_25
Histiona aroides, Histiona, Eukaryota

Not on your lists

comp(24631..25497)
DNA (867bp) protein (289aa)
Cytochrome c oxidase subunit 3 n=1 Tax=Histiona aroides RepID=M4QCX3_9EUKA rbh
Cytochrome c oxidase subunit 3 {ECO:0000256|RuleBase:RU003375}; TaxID=392300 species="Eukaryota; Jakobida; Histionidae; Histiona.;" source="Histiona aroides (Flagellate).;"
cox3; Cox3; K02262 cytochrome c oxidase subunit 3 rbh
SCNpilot_cont_750_bf_scaffold_512_26
Trebouxiophyceae sp. MX-AZ01, Trebouxiophyceae, Chlorophyta, Viridiplantae

Not on your lists

comp(25527..27137)
DNA (1611bp) protein (537aa)
Cytochrome c oxidase subunit 1 {ECO:0000256|RuleBase:RU000369}; EC=1.9.3.1 {ECO:0000256|RuleBase:RU000369};; Flags: Fragment;; TaxID=1208065 species="Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; unclassified Trebouxiophyceae.;" source="Trebouxiophyceae sp. MX-AZ01.;"
cox1; cytochrome c oxidase subunit 1; K02256 cytochrome c oxidase subunit 1 [EC:1.9.3.1] rbh
Cytochrome c oxidase subunit 1 (Fragment) n=1 Tax=Trebouxiophyceae sp. MX-AZ01 RepID=J7KEH1_9CHLO rbh
SCNpilot_cont_750_bf_scaffold_512_27
unknown

Not on your lists

comp(29962..30393)
DNA (432bp) protein (144aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_512_28
Seculamonas ecuadoriensis, Seculamonas, Eukaryota

Not on your lists

comp(30516..31517)
DNA (1002bp) protein (334aa)
NADH-ubiquinone oxidoreductase chain 1 {ECO:0000256|RuleBase:RU000473}; EC=1.6.5.3 {ECO:0000256|RuleBase:RU000473};; TaxID=221724 species="Eukaryota; Jakobida; Seculamonas.;" source="Seculamonas ecuadoriensis (Flagellate).;"
nad1; NADH dehydrogenase subunit 1; K03878 NADH-ubiquinone oxidoreductase chain 1 [EC:1.6.5.3] rbh
NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Seculamonas ecuadoriensis RepID=M4QB19_9EUKA rbh
SCNpilot_cont_750_bf_scaffold_512_29
Reclinomonas americana, Reclinomonas, Eukaryota

Not on your lists

comp(31524..33587)
DNA (2064bp) protein (688aa)
NADH-ubiquinone oxidoreductase 75 kDa subunit; EC=1.6.5.3;; EC=1.6.99.3;; Complex I-75kD; Short=CI-75kD;; NADH dehydrogenase subunit 11; TaxID=48483 species="Eukaryota; Jakobida; Histionidae; Reclinomonas.;" source="Reclinomonas americana.;"
NADH dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial-like; K03934 NADH dehydrogenase (ubiquinone) Fe-S protein 1 [EC:1.6.5.3 1.6.99.3]
NADH-ubiquinone oxidoreductase 75 kDa subunit n=1 Tax=Reclinomonas americana RepID=NDUS1_RECAM
SCNpilot_cont_750_bf_scaffold_512_30
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33997..35475)
DNA (1479bp) protein (493aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
ATP synthase subunit alpha n=1 Tax=Azospirillum amazonense Y2 RepID=G1XVV2_9PROT
atpA; ATP synthase, F1 sector, alpha subunit
Displaying items 1-30 of 41 in total

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