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SCNpilot_cont_750_bf_scaffold_1523_9

Organism: SCNPILOT_EXPT_750_BF_Rhizobiales_65_15

partial RP 37 / 55 MC: 1 BSCG 39 / 51 MC: 1 ASCG 9 / 38
Location: comp(6502..7122)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IFT2_XANP2 similarity UNIREF
DB: UNIREF100
  • Identity: 58.3
  • Coverage: 180.0
  • Bit_score: 193
  • Evalue 2.80e-46
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 58.3
  • Coverage: 180.0
  • Bit_score: 193
  • Evalue 8.70e-47
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.3
  • Coverage: 180.0
  • Bit_score: 193
  • Evalue 3.90e-46

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Taxonomy

Xanthobacter autotrophicus → Xanthobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 621
ATGGCTGTCGCATTCGCCTTCACTGTCGAACAGATGCGCGAGGCGCCGGCCGTCGCGCGGGGAGATCGGTTCGTCGCTTTGTTCGATCCCAATGCCTTGATCGCCGCGATCGCGCGCTCGGGTGACCGGGCCGCTTTCGCCGAGCTGTTCGATCATTTCGCGCCGCGCGTGAAAGGGTTGCTGATGCGCGGCGGAGCCTCGGCCGAACTGGCCGAGGAGATCGCCCAGGAGACGCTGCTGTCGGTCTGGCGCAAGGCGGCCCTGTTCGATCCCGCCAAGGCCAGCGCCTCGACCTGGATCGCGACCATCGCGCGCAACCAGCGTATCGACATCGCCCGGCGGGAGACCCGCTCGCGGCTTTCGCAGGTTTACGAGATTCTCGATGAAGAAGCGCCCGAACGCCCTGACGAGATGGTCGCCGGAGCCCAGCGCGAAGCGCGGGTCAAGGCGGCCATGACGGAGCTGTCCGCCGATCAGTACCGGGTCGTGGAGCTCGCCTTTATCGAGGGCTTCAGCCATCAGGACGTGGCGAAGCGCCTCGCCATTCCGCTCGGTACCGTGAAATCGCGGTTGCGGCTTGCCCTGTCGCATCTGCGCGGCAAGCTGGAGGACCTGCGATGA
PROTEIN sequence
Length: 207
MAVAFAFTVEQMREAPAVARGDRFVALFDPNALIAAIARSGDRAAFAELFDHFAPRVKGLLMRGGASAELAEEIAQETLLSVWRKAALFDPAKASASTWIATIARNQRIDIARRETRSRLSQVYEILDEEAPERPDEMVAGAQREARVKAAMTELSADQYRVVELAFIEGFSHQDVAKRLAIPLGTVKSRLRLALSHLRGKLEDLR*