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SCNpilot_cont_750_bf_scaffold_2070_4

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_65_9_partial

partial RP 17 / 55 MC: 1 BSCG 17 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: 2567..3685

Top 3 Functional Annotations

Value Algorithm Source
Secretin and TonB N terminus short domain protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WW38_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 49.9
  • Coverage: 375.0
  • Bit_score: 329
  • Evalue 5.80e-87
Putative TonB-dependent receptor {ECO:0000313|EMBL:GAM02437.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.1
  • Coverage: 349.0
  • Bit_score: 326
  • Evalue 6.90e-86
TonB-dependent receptor-like protein similarity KEGG
DB: KEGG
  • Identity: 44.1
  • Coverage: 376.0
  • Bit_score: 300
  • Evalue 7.00e-79

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Taxonomy

Sphingomonas parapaucimobilis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1119
GTGTCACGGCTTGTCGCGGGCCCCCTTCTCCTCGCTGCCGTTTCGGGCGTCGCGACCCCGGCCTGGGCTGCCGAGCGCGGCGGCGTCGCGCTGAACATTCCCGCGGGCCGGCTGGTCGACGCGATCGTCGCGATCGGGCGGCAGGGCGGGGTGAATGTCGCGACGACGGTCTCCGGGCTCGGCGCGATGCGCACCAAGGGCGTCAAGGGCCGGCTGACGATCGAGGCCGCATTCGCGCGGCTGCTCGCCGACACCGGGCTGGTCGCGGTGCGGATCGGGCCCGATGCGTTCAGGATCGAGCGCGCCGCGCCGCCGCGCCCGCGCCAGCCGCCGCCCGCCCCCAGCCGGCCCGTCCCCCCGCCGCTCGTATCGCCCTCGCTCCTCGCCGAGCCGGCGCCCGATGTCATCGTCACCGCGGGCAAGCAGCGCAGCCCGCTCGACCGCTATCCCGGCGCGGCCGCGGTGGTGTGGTTCGATACCCCCGCGCTGCGCAACGCCGGCGCGCGCGGCACCGCCGCGCTGGTCGACGAGCTGCCGGTGCTGACCTCGACCAGCCTCGGCCCCGGCCGCGAGAAGCTGTTTCTGCGCGGGATCGCCGACAGCAGCTTCTCGGGCTCCAGCCAGGCGACGGTGGGGCAATATCTCGGCGAGGTGCAGCTCAACTATAACGCCCCCGATCCCGATCTCAGCCTCTACGATATGGAGCGGGTCGAGATCCTCGAAGGCCCGCAGGGCACGCTTTACGGTGCGGGGTCGCTCGGCGGGGTGGCGCGGCTCATCCCGCATCAGCCCAAGCCCGGCGTCTGGGAAGGCAGCGTCCAGGCCGCGCTCGGCGCGACGTGGCACGGCGGGGTAGGCAGCGACGTCGCGGGGGTGCTCAACATCCCGCTGTGGCAGGGGGCGGCGGTGCGCCTGCTCGGTTATGGCAGCCGCTCGCCCGGCTATATCGACGACGTCCAGCGCGGGCTCAACGACGTCAACGACACGCGCAAGTTCGGCGCGCGCGGCGCGTTCCGGTTCGAGCCGGGGGATCATTGGTCGGTCGAGGTCGGCGGCGCCTTCCAGTCGATCCGCAACAACGACGCGCAATATACCGAGGCGACCGGCCGCCCGCTGTAG
PROTEIN sequence
Length: 373
VSRLVAGPLLLAAVSGVATPAWAAERGGVALNIPAGRLVDAIVAIGRQGGVNVATTVSGLGAMRTKGVKGRLTIEAAFARLLADTGLVAVRIGPDAFRIERAAPPRPRQPPPAPSRPVPPPLVSPSLLAEPAPDVIVTAGKQRSPLDRYPGAAAVVWFDTPALRNAGARGTAALVDELPVLTSTSLGPGREKLFLRGIADSSFSGSSQATVGQYLGEVQLNYNAPDPDLSLYDMERVEILEGPQGTLYGAGSLGGVARLIPHQPKPGVWEGSVQAALGATWHGGVGSDVAGVLNIPLWQGAAVRLLGYGSRSPGYIDDVQRGLNDVNDTRKFGARGAFRFEPGDHWSVEVGGAFQSIRNNDAQYTEATGRPL*