ggKbase home page

SCNpilot_cont_750_bf_scaffold_3779_4

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_65_9_partial

partial RP 17 / 55 MC: 1 BSCG 17 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: comp(2161..2727)

Top 3 Functional Annotations

Value Algorithm Source
peptide chain release factor 1 n=1 Tax=Sphingomonas echinoides RepID=UPI00026C9C3A similarity UNIREF
DB: UNIREF100
  • Identity: 89.8
  • Coverage: 187.0
  • Bit_score: 337
  • Evalue 1.10e-89
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.0
  • Coverage: 187.0
  • Bit_score: 341
  • Evalue 1.10e-90
prfA; peptide chain release factor 1; K02835 peptide chain release factor 1 similarity KEGG
DB: KEGG
  • Identity: 92.0
  • Coverage: 188.0
  • Bit_score: 335
  • Evalue 1.30e-89

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas sanxanigenens → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 567
GTGTTCGCGCGGCTCAAGTTCGAGAGCGGGGTGCATCGCGTCCAGCGCGTACCGGTCACCGAAAGCGGCGGGCGTATCCACACTTCCGCCGCCACCGTCGCGGTGCTGCCCGAGGCGGAGGAGGTCGACGTGCAGATCGACGACAAGGATCTGCGGATCGACGTCTATCGTTCGTCGGGGCCGGGCGGCCAATCGGTCAACACCACCGATTCGGCGGTGCGCATCGTCCATCTGCCGACCGGGCTGACCGTGATCCAGCAGGACGAGAAGTCGCAGCACAAGAACAAGGCCAAGGCGCTCAAGGTGCTGCGTACCCGGCTCTATGAGATGGAACGCGAGCGGCTCCAGGCCGAGCGCGCCGGCGCGCGCAAGTCGATGGTCGGATCGGGCGATCGGTCGGAACGTATCCGCACCTATAATTTCCCGCAGGGCCGGGTGACCGACCACCGCATCAACCTGACGCTCCACCGCCTGCCGGAGATTCTTGCCGGCGATATGGACGAATTGCTCGGCGCGCTGATCGCCGAGGATGAGGCGGAGCGGCTGGCGACGTTGGATGCCGCCTGA
PROTEIN sequence
Length: 189
VFARLKFESGVHRVQRVPVTESGGRIHTSAATVAVLPEAEEVDVQIDDKDLRIDVYRSSGPGGQSVNTTDSAVRIVHLPTGLTVIQQDEKSQHKNKAKALKVLRTRLYEMERERLQAERAGARKSMVGSGDRSERIRTYNFPQGRVTDHRINLTLHRLPEILAGDMDELLGALIAEDEAERLATLDAA*