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SCNpilot_cont_750_bf_scaffold_4318_2

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_65_9_partial

partial RP 17 / 55 MC: 1 BSCG 17 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: 599..1135

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor n=1 Tax=Sphingomonas echinoides RepID=UPI00026CA5F9 similarity UNIREF
DB: UNIREF100
  • Identity: 51.5
  • Coverage: 171.0
  • Bit_score: 164
  • Evalue 9.10e-38
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:AIT05927.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.7
  • Coverage: 163.0
  • Bit_score: 170
  • Evalue 1.80e-39
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 47.0
  • Coverage: 166.0
  • Bit_score: 132
  • Evalue 1.60e-28

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Taxonomy

Sphingomonas taxi → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 537
GTGCGCGTCGACACCGCGGAAACGCAGGTAATGGCGGCGCCGGGGCTCGTCGCCGCCTATCGCGAGCAGCGCGCGCAGCTGTTGCGGCTGCTGGCGGCGCGGCTCGGCAGCGCGGCGGACGCGGAGGATGCGCTGCAGGACCTGTGGCTGCGCGTCGCGGCCAATCCGCAGCCCGAGCTGGCCAACCCGGCCGCTTATCTGATGCGCATGGCGAACAATCTGGCGACCGACCGGCGGATCGCGGCGCAGCGCCGCGCGGTGCTGGAAACCGATTGGGCGGCGTCGGGCGACGTGGCGACCGACCGGCCTTCGCCGGAACGCGAATTGCTGGCGCGCGACGCGCTGCGCCACGCCGATCGGGTGATCGCCGCGATGCCGGAACGGATGCGCCTCGCCTATCGGCTGTTTCGCATCGATCAGGTGCCGCAACGCGAGATCGCGACGCGGCTCGACATATCGGTCAGTGCGGTGGAGAAATTGCTCCAGCGTGCCTATCGCCGGCTGCATGCGCTGGCGGATGGAGGGGACGATGACTGA
PROTEIN sequence
Length: 179
VRVDTAETQVMAAPGLVAAYREQRAQLLRLLAARLGSAADAEDALQDLWLRVAANPQPELANPAAYLMRMANNLATDRRIAAQRRAVLETDWAASGDVATDRPSPERELLARDALRHADRVIAAMPERMRLAYRLFRIDQVPQREIATRLDISVSAVEKLLQRAYRRLHALADGGDDD*