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SCNpilot_cont_750_bf_scaffold_3621_5

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_65_9_partial

partial RP 17 / 55 MC: 1 BSCG 17 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: comp(3500..4543)

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.7
  • Coverage: 347.0
  • Bit_score: 584
  • Evalue 1.30e-163
3-isopropylmalate dehydrogenase (EC:1.1.1.85) similarity KEGG
DB: KEGG
  • Identity: 80.6
  • Coverage: 346.0
  • Bit_score: 540
  • Evalue 3.70e-151
  • rbh
3-isopropylmalate dehydrogenase n=1 Tax=Sphingomonas melonis RepID=UPI00036DE76C similarity UNIREF
DB: UNIREF100
  • Identity: 81.2
  • Coverage: 345.0
  • Bit_score: 559
  • Evalue 3.20e-156

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Taxonomy

Sphingomonas sp. RIT328 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1044
ATGGCATTGATCGCGATCCTGCCGGGCGACGGCATCGGCCCCGAAGTAACCACCGAGGCGCGGCGCGTGCTCGAACGGCTCGGGCTCGATCTCAGCTTCGAGGAGGCACCGGTCGGCGGCGCGGCCTATCATGCCGCGGGGCATCCGCTGCCGCCGGCGACGCTCGATCTCGCGCGGCGCGCCGACGCGATCCTGTTCGGCGCGGTGGGCGATCCGACCTGCGATTCGCTCGACCGGCATCTGCGCCCCGAACAGGCGATCCTCGGGCTGCGCAAGGCGCTCACCCTGTTCGCCAATCTGCGCCCGGCGAAGATGTTCGCGGGGATGGAGGACGCCTCGGCGCTGCGCCCCGAAGTGGCGCGCGCGATCGATCTGGTCATCGTCCGCGAGCTGAACGGCGACGTCTATTTCGGCGAAAAGGGGATGCGCACCACCGCGGACGGGCTGCGCCAGGGCTATGACGTGATGAGCTATGACGAGGCCGAGGTGCGCCGCATCGCGGTCGCCGGGTTCGAGGCGGCGCGGCGGCGCCGCGGCAAGCTCTGCTCGATCGACAAGGCCAATGTTCTCGAAACCTCGCAATTGTGGCGCGACGTGGTGATCGAGACCGCGGCGGATTACGCCGATGTCACGCTGACCCATATGTATGTCGACAATGCCGCGATGCAGCTGGTGCGCGATCCCGGCCAGTTCGACGTGATCGTCACCGGCAATTTGTTCGGCGACATCCTCTCCGACCAGGCCTCGATGTGCGTCGGGTCGATCGGGCTGCTGCCCTCGGCGGCGCTCGATGTCGCGGGCAAGGGGCTGTACGAGCCGATCCACGGCTCGGCGCCCGATATCGCCGGGCAGGGCAAGGCCAATCCGTGCGCCGCGATCCTCTCCGCGGCGATGATGCTGCGCCATTCGCTCGGCGAGCCGGCGGCGGCCGATCGTATCGAGGCGGTGGTGGCGGCCGCGCTCGCCTCGGGCAAGCGCACCGCCGATCTCGGCGGCACCTGCTCGACCCGCGAGATGGGCGACGCGGTGCTGGCGGCGCTCTGA
PROTEIN sequence
Length: 348
MALIAILPGDGIGPEVTTEARRVLERLGLDLSFEEAPVGGAAYHAAGHPLPPATLDLARRADAILFGAVGDPTCDSLDRHLRPEQAILGLRKALTLFANLRPAKMFAGMEDASALRPEVARAIDLVIVRELNGDVYFGEKGMRTTADGLRQGYDVMSYDEAEVRRIAVAGFEAARRRRGKLCSIDKANVLETSQLWRDVVIETAADYADVTLTHMYVDNAAMQLVRDPGQFDVIVTGNLFGDILSDQASMCVGSIGLLPSAALDVAGKGLYEPIHGSAPDIAGQGKANPCAAILSAAMMLRHSLGEPAAADRIEAVVAAALASGKRTADLGGTCSTREMGDAVLAAL*