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SCNpilot_cont_750_bf_scaffold_8386_4

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_65_9_partial

partial RP 17 / 55 MC: 1 BSCG 17 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: comp(3286..3774)

Top 3 Functional Annotations

Value Algorithm Source
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.5
  • Coverage: 161.0
  • Bit_score: 256
  • Evalue 2.90e-65
ruvC; Holliday junction resolvase (EC:3.1.22.4) similarity KEGG
DB: KEGG
  • Identity: 75.5
  • Coverage: 159.0
  • Bit_score: 238
  • Evalue 1.90e-60
crossover junction endodeoxyribonuclease RuvC n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000288654D similarity UNIREF
DB: UNIREF100
  • Identity: 81.6
  • Coverage: 158.0
  • Bit_score: 257
  • Evalue 9.40e-66

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 489
TTGATCATTCTCGGCGTCGATCCCGGCTTGAGCACGACCGGCTGGGGGCTGATCCGCGCCGAGGGCAACCGGTTGTCGCATATCGCCAACGGCAAGATCACCACCGATACCGCCGAACCGCTGGCGCGGCGGCTGGCGTATCTCGATTCGGTGCTCGCCGCGCTGATCGTCGATCACGCCCCCGATGCCGCGGCGGTGGAGGAGGTGTTCGTCAACGCCAACCCGCAATCGACGCTCAAGCTCGGGCAAGCGCGCGGGATCGCGCTGCTCGCGATCGCCCGCGCCGGGATCGAGCCGGGCGAATATGCCGCGCGGCTGGTCAAGAAAGCGGTGGTCGGGGTCGGCAACGCCGAAAAGGCGCAGGTTCACGCGATGGTCGCGCGGCTGCTGCCCGGCGCGAAGATCGCCGGGCCCGACGCCGCCGACGCGCTCGCGGTGGCGATCACCCACGCGCATCACCTTGCCAGCCGGCGCGCGGGGATCGTTTGA
PROTEIN sequence
Length: 163
LIILGVDPGLSTTGWGLIRAEGNRLSHIANGKITTDTAEPLARRLAYLDSVLAALIVDHAPDAAAVEEVFVNANPQSTLKLGQARGIALLAIARAGIEPGEYAARLVKKAVVGVGNAEKAQVHAMVARLLPGAKIAGPDAADALAVAITHAHHLASRRAGIV*