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SCNpilot_cont_750_bf_scaffold_8944_6

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_65_9_partial

partial RP 17 / 55 MC: 1 BSCG 17 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: 3620..4822

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane autotransporter barrel domain protein n=1 Tax=Burkholderia cenocepacia (strain MC0-3) RepID=B1KB73_BURCC similarity UNIREF
DB: UNIREF100
  • Identity: 52.1
  • Coverage: 384.0
  • Bit_score: 372
  • Evalue 6.40e-100
Membrane protein {ECO:0000313|EMBL:KFX26496.1}; Flags: Fragment;; TaxID=305 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum (Pseudomonas solanacearum).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.7
  • Coverage: 414.0
  • Bit_score: 391
  • Evalue 1.10e-105
outer membrane autotransporter similarity KEGG
DB: KEGG
  • Identity: 52.1
  • Coverage: 384.0
  • Bit_score: 372
  • Evalue 2.00e-100

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Taxonomy

Ralstonia solanacearum → Ralstonia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1203
ATGGGTCATTCGGTTTCGGCGCGTCGCATGAACCGGATTTCGCGGTCCTTGCGTTCGGGAAGCGCAGCTTCCGTCATCGCGTGGCTCGCGTTATTCCCAACCGAGGCCGAGGCGCAATGCGCAGCAAATCCAGTCGGCAGTTCGACGATCGTCTGCTCGGGCGCTGTCGTTGTCTATTCCAATACGAGCAATGGCCTCGACGTTACGGTTGATCCGACCGCGACGATCACGGTGGTGCCGATTGCCGGTGGAACCGCGCTTTCGCTCACCGGCAACAATGTCACGCTTACCAACAACGGCTCGATCAATGCCGCCGCCGGGCCGACGTTCGCGACGAACGGTGCGATCGTCGGGAATACGGCCACCGGCAGCACAGTGAACGTCACCAATAACGGATCGATCACCGCGGGAACGTCGCTCCTCGCCGGCCCGGCGCTCACGGTGAACAACGGTGTCGGCGGCGTAAGTACGATCGTCAATTCCGGGACAATTGGCGCGGCGGGCTTTGCGATCGGCTCGGCGGCGGTTTCCACCGCAGGCAGCGGCACCGTCAATTTCACCAACAATTACGGCGGAGCGATCAACGGGTCGGCGGTCTTTGCCGGCGGTTCGAGCGGCAACAGCTTCATCAACGGCGGCACGATCACCGGCGGCGTCTCGCTCGGCGCGTCGGCGGGCGCGCTCAACAGCTTCACGGCGATGACCGGTTCGTCGATCGGCACGACCGTCGATGCGGGTATCGGGACCAACAGCACGCTCAGCCTCGCGCAGAACAGCGGCGGTGGCAGCCCGACGAGCGGCTCGATCGCGATCGGCAGCTACACCAATTTCTCCAACCTCTCGGTCCAGGGCGGAACCTGGAACATCACCGGTGCCTGGGTGCCGGCGGCGGCGTCGACCCCTGTCGTGACGCTTGGCGGCGGGACCGCGATCGTCAACCTGCCCGGCGTTTTCGCCACCGCGAGCATTACCGGCAACGGCGGGGCGCTGCAGGCAGGTGTCGCAGGCCTGTCGCTCGCCAACGCGATCAATCTCACCGGCGGCCTGGCGATCAGCGGCAGCAATGGACTGACGCTGAGCGGGGCGATCGGCGGTGCTGGCGGTCTGACGATGGGTGGGGCCGGGACGCTGACGCTGACCGGCGCGAACGCCTACGCTGGCGGCACGACATTGAATGGCGGCGGCGGCCTCGTGCTCGGCAAC
PROTEIN sequence
Length: 401
MGHSVSARRMNRISRSLRSGSAASVIAWLALFPTEAEAQCAANPVGSSTIVCSGAVVVYSNTSNGLDVTVDPTATITVVPIAGGTALSLTGNNVTLTNNGSINAAAGPTFATNGAIVGNTATGSTVNVTNNGSITAGTSLLAGPALTVNNGVGGVSTIVNSGTIGAAGFAIGSAAVSTAGSGTVNFTNNYGGAINGSAVFAGGSSGNSFINGGTITGGVSLGASAGALNSFTAMTGSSIGTTVDAGIGTNSTLSLAQNSGGGSPTSGSIAIGSYTNFSNLSVQGGTWNITGAWVPAAASTPVVTLGGGTAIVNLPGVFATASITGNGGALQAGVAGLSLANAINLTGGLAISGSNGLTLSGAIGGAGGLTMGGAGTLTLTGANAYAGGTTLNGGGGLVLGN