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SCNpilot_cont_750_bf_scaffold_12659_8

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_65_9_partial

partial RP 17 / 55 MC: 1 BSCG 17 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: 5825..6382

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B3E5F7 similarity UNIREF
DB: UNIREF100
  • Identity: 63.3
  • Coverage: 177.0
  • Bit_score: 208
  • Evalue 5.70e-51
TetR family transcriptional regulator {ECO:0000313|EMBL:EGD59242.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.7
  • Coverage: 182.0
  • Bit_score: 202
  • Evalue 4.40e-49
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 57.1
  • Coverage: 184.0
  • Bit_score: 189
  • Evalue 1.10e-45

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Taxonomy

Novosphingobium nitrogenifigens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 558
ATGACGGCTGCGGCGAAACCCTATCACCACGGCGATCTGCGCGCGGCGCTGGTCGCGGAAGGATTGCTGCTGATCGAGGAGCAGGATGCCGACGATCTGTCGCTGCGCGAACTGGCGCGGCGGGTCGGGGTCAGCGCGACCGCGGTCTATCGCCATTTCCCCGATAAAGCGGCGCTGATGGCGGCACTGGCGGGCGAGGCGCTGACGCGGCTCGCGGCGGCGCAGCGCGCGGCGTCGGAGCGCGCCGGCGGCGGCTCGGCGGGGTTCAGCGCGACGGGGGCGGCCTATGTCCGCTTCGCGCGCGACAATCCGGGGCTGTTCCGGCTGGTCTTCGCGCATCCGGTGACCCCGGGGCACGCCGAAAAGTCGAACGACGAGGCGATGACGATGCTCAAGGCCGGCGCCGCGGCGCTGGCGCCGCCGGGGACAGACGCGCGCGTCTTCGCGTTGCGCTCATGGGCGCTCGCGCACGGGCTGGCGATGCTGATGCTCGACGGTCAGGTCCAGGTAGACGATGCGACGATCGATCGGGTGATCGACGTAACGATGAGCGGCTAG
PROTEIN sequence
Length: 186
MTAAAKPYHHGDLRAALVAEGLLLIEEQDADDLSLRELARRVGVSATAVYRHFPDKAALMAALAGEALTRLAAAQRAASERAGGGSAGFSATGAAYVRFARDNPGLFRLVFAHPVTPGHAEKSNDEAMTMLKAGAAALAPPGTDARVFALRSWALAHGLAMLMLDGQVQVDDATIDRVIDVTMSG*