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SCNpilot_cont_750_bf_scaffold_13586_1

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_65_9_partial

partial RP 17 / 55 MC: 1 BSCG 17 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: comp(1..237)

Top 3 Functional Annotations

Value Algorithm Source
conjugal transfer protein TraE n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C6BA similarity UNIREF
DB: UNIREF100
  • Identity: 84.8
  • Coverage: 79.0
  • Bit_score: 130
  • Evalue 6.40e-28
TraE protein {ECO:0000313|EMBL:GAN14660.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 79.0
  • Bit_score: 148
  • Evalue 5.50e-33
TraE family protein; K12067 conjugal transfer pilus assembly protein TraE similarity KEGG
DB: KEGG
  • Identity: 69.6
  • Coverage: 79.0
  • Bit_score: 112
  • Evalue 5.70e-23

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Taxonomy

Sphingomonas paucimobilis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 237
ATGGACCTCGCATTCAGCCACGCAAGCAACCAGCGGGTTCTTCGCCAGCGCAACTTCCTGGTCGTGGTCGCCGGCGCGCTCGCGGCGATAACAGCGCTGCTGCTCGCCTTCGGCATCTCGCGAGACCGCGAGATCGTCCTCCAGCCCGTACTGCGCTCGCCGGTCACAGTCAGCAGTGCCGGCGTCTCCCGCGAATATCTCGAGATGATCACGCGCGACGTGGTGGTGCTCACGCTC
PROTEIN sequence
Length: 79
MDLAFSHASNQRVLRQRNFLVVVAGALAAITALLLAFGISRDREIVLQPVLRSPVTVSSAGVSREYLEMITRDVVVLTL