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SCNpilot_cont_750_p_scaffold_523_20

Organism: SCNPILOT_CONT_300_BF_Xanthomonadales_66_150

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 ASCG 11 / 38
Location: comp(24017..24874)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma 70 n=1 Tax=Dyella ginsengisoli RepID=UPI00034DE003 similarity UNIREF
DB: UNIREF100
  • Identity: 78.2
  • Coverage: 285.0
  • Bit_score: 456
  • Evalue 1.80e-125
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.6
  • Coverage: 285.0
  • Bit_score: 462
  • Evalue 4.70e-127
alternative sigma factor RpoH; K03089 RNA polymerase sigma-32 factor similarity KEGG
DB: KEGG
  • Identity: 78.9
  • Coverage: 285.0
  • Bit_score: 453
  • Evalue 6.40e-125

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Taxonomy

Mizugakiibacter sediminis → Mizugakiibacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 858
ATGAGCGAAGCCTTGGTCGCCAACAACCTGCCGATCCCCAACGCAGTCGGCAGCCTCGACGCCTATATTGGTGCGGTCCACCGGATTCCGGTATTGGAAGCCGCGGAAGAACACGAACTCGCGCAGCGCTACCGCGAAGACGAAGACCTCGACGCGGCGCGCAAGCTGGTGATGTCGCACCTGCGGTTCGTGGTGCACGTGGCACGCGGCTATTCGGGCTACGGCCTGCAAATGGGCGACCTGATCCAGGAAGGCAACATCGGCCTGATGAAGGCGGTCAAGCGTTTCGATCCCGACCACGGGGTGCGCCTGGTCAGCTTCGCGGTGCACTGGATCCGCGCCGAAATGCACGAGTTCATCCTGCGCAACTGGCGCATCGTCAAGGTGGCCACCACCAAGGCCCAGCGCAAGCTGTTCTTCAACCTGCGCAAGTCCAAGAAGCGCTTGGGTTGGATGAACATGGAGGAAGTGCGCGAGGTGGCCCGGAATCTCGGCGTGCCCGAAACCACCGTGCTGGAAATGGAATCGCGCCTGTCCGGACGCGACATAGGCTTCGATGCGCCCACCGAGACCGACGACGATGCGCCGCCCGCACCGGTCGCGTACCTCGAAGACCACGGTGCCGATCCGTACCTGCAACTGGCCGATGCCGACCAGGAAGAGCACCAGATCGACACCTTGCAGGGCGCTCTCGCGAAACTGGATGAACGCACCCGCGACATCATCCGCCGCCGCTGGCTGGCCGAAGACAAGGCCACCCTGCAGGATCTTGCCGATGACTACGGCGTGTCGGCCGAACGTATCCGCCAACTCGAGGCGAATGCGATGAAGAAGATGCGCGGAGCGTTTGCAGCGTAA
PROTEIN sequence
Length: 286
MSEALVANNLPIPNAVGSLDAYIGAVHRIPVLEAAEEHELAQRYREDEDLDAARKLVMSHLRFVVHVARGYSGYGLQMGDLIQEGNIGLMKAVKRFDPDHGVRLVSFAVHWIRAEMHEFILRNWRIVKVATTKAQRKLFFNLRKSKKRLGWMNMEEVREVARNLGVPETTVLEMESRLSGRDIGFDAPTETDDDAPPAPVAYLEDHGADPYLQLADADQEEHQIDTLQGALAKLDERTRDIIRRRWLAEDKATLQDLADDYGVSAERIRQLEANAMKKMRGAFAA*