ggKbase home page

SCNpilot_expt_500_p_scaffold_12_12

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 12736..14145

Top 3 Functional Annotations

Value Algorithm Source
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.0
  • Coverage: 468.0
  • Bit_score: 780
  • Evalue 1.70e-222
RSp1043; two-component sensor histidine kinase transcription regulator protein (EC:2.7.3.-); K02484 two-component system, OmpR family, sensor kinase [EC:2.7.13.3] similarity KEGG
DB: KEGG
  • Identity: 62.7
  • Coverage: 469.0
  • Bit_score: 517
  • Evalue 4.60e-144
  • rbh
Signal transduction histidine kinase n=1 Tax=Variovorax sp. CF313 RepID=J2KJK3_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 88.0
  • Coverage: 468.0
  • Bit_score: 780
  • Evalue 1.20e-222
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1410
ATGCTTAGTTTCCGCAGGCGGCTGGCGCTGGCGCATGTCAGCGTGATCGTGGTGGTGATGACGATCGCCGCCTTCGGCTCTTACTTCGTGTTCTCGCGCAACGTGCACGGCGAGCTCGACGCGGCGCTGCTCGCGCTGGCCGAGACCGAGCTGGGCATGCTGCTGTCGGCGGGCGATGGCGACGCGGTCATCGTGCACGAGGCGCCGCCCGGCCCGGCCGCGCCTTCGTTCGTGCGGCTCGACCGTCTGGTGCAGATCGTCGACGCCGACGGCCGGGTGCTCGCGCGCAGCAGCAACCTGGGCGAGGCGCAACTGCCCATTCCCCCCGTGCTGCGCGAGCGGCTGGCCGCCGGCGAGACCGTGTTCGAGACGCTCGACGGCTTCGGCGAGGAGCCGACCCGCATGGTGTCGGTGCCCGTGCCCGGGCGGCAGAAGCTGCTGGCGGTGCAGGTCGCGGGCTCGCTCGACGACGTGAACCGCACCCTGGGGCTGGCCAGCGTGCTGTTCCTGATCCTGGGCATTTCGCTGTTGCTGGCACTGGCCGCGGCGGGGGCGCTCATCACGCGCCGCGCCTTCGGCGCCATTGCCGACGTGGTGCAGCAGGCCCGGCGCATCAGCGACGCTAACCTGGGCGAGCGCCTGCCGCACCCGGGCACGCGCGACGAGATCGGCCGGCTGGTCGACACCCTCAACGACATGCTCAGTCGCATCGAGAACGGCATGGAGGCACAGCGCCGCTTCACTTCCGACGCCTCGCACGAGCTGCGCTCGCCGCTGTCGCGCCTGCGCACCGAGCTCGAACTCGCGCTGCGCCGGCCGCGCGATCCGGCCGATTACGTGGAGACGCTGCATTCGTCGCTGGAAGAGGTGGAGTCGCTCACGCTGCTGGTCGAAGAGCTGCTGGTGCTCGCGCGGATCGACGCCGGCCAGGAGCGCGACGCGGCCGAAAAAGTGTCGCTCAACATGCTGGCCGAGGACGCGGTGCGGCGCCTCGAACCGATGGCCAGGGAACGCCGCCTGTCGCTGGTGCTGGAGCCTTCGCCGCCGGTGGCCGCGCGGGTGGCGCGCGGCGCGGCGAGCCTGGCGCTGGCCAATCTGCTGGACAACGCGCTCAAGTTCTCGCCGCCCGGCACGGTGGTGAGCGTGAGCGTGCGCGCCGACCTGGAGGCGAACGAGGCAATCCTCAGCGTGTCGGACCACGGGCCGGGCATTCGCGGCGATGAGTTGCCGCACCTGTTCGAGCGCTTCTATCGCGGCGCCACCGCGCGGTCGGACGAGAAGACGCCGGGGCTCGGGCTGGGGCTGGCGTTGTCGCAGGCAGTGGTGCATGCGCATGGGGGGCGCATCCAGGCGGCGAACGAGGTGGGGGGCGGGGCACGCTTCGACATGCGGTTGCGGCTGGCGCGCTGA
PROTEIN sequence
Length: 470
MLSFRRRLALAHVSVIVVVMTIAAFGSYFVFSRNVHGELDAALLALAETELGMLLSAGDGDAVIVHEAPPGPAAPSFVRLDRLVQIVDADGRVLARSSNLGEAQLPIPPVLRERLAAGETVFETLDGFGEEPTRMVSVPVPGRQKLLAVQVAGSLDDVNRTLGLASVLFLILGISLLLALAAAGALITRRAFGAIADVVQQARRISDANLGERLPHPGTRDEIGRLVDTLNDMLSRIENGMEAQRRFTSDASHELRSPLSRLRTELELALRRPRDPADYVETLHSSLEEVESLTLLVEELLVLARIDAGQERDAAEKVSLNMLAEDAVRRLEPMARERRLSLVLEPSPPVAARVARGAASLALANLLDNALKFSPPGTVVSVSVRADLEANEAILSVSDHGPGIRGDELPHLFERFYRGATARSDEKTPGLGLGLALSQAVVHAHGGRIQAANEVGGGARFDMRLRLAR*