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SCNpilot_expt_500_p_scaffold_105_7

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(7467..7736)

Top 3 Functional Annotations

Value Algorithm Source
flagellar biosynthesis protein FliQ n=1 Tax=Variovorax paradoxus RepID=UPI000366ACD3 similarity UNIREF
DB: UNIREF100
  • Identity: 95.5
  • Coverage: 89.0
  • Bit_score: 166
  • Evalue 1.60e-38
fliQ; flagellar biosynthetic protein FliQ similarity KEGG
DB: KEGG
  • Identity: 78.7
  • Coverage: 89.0
  • Bit_score: 143
  • Evalue 4.50e-32
Flagellar biosynthetic protein FliQ {ECO:0000313|EMBL:AGU51412.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.7
  • Coverage: 89.0
  • Bit_score: 143
  • Evalue 2.00e-31

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 270
ATGACCCCCGAATCAGTCATGACCATGGGCCATCGGGCCATGGAAATCTCGCTGCTGCTGGGCGCCCCGCTGTTGCTGGTGGCGCTGGTCATCGGCCTGATCGTCAGCATCTTCCAGGCGGCCACGCAGATCAACGAGGCCACCCTTTCCTTCATTCCCAAGCTGCTCGCCGTGTTCGCGACGCTGGTCATCGCCGGGCCGTGGATGCTCGACCGCATGCTCGACTACATGCGCGCGCTGTTCGCCGGCATCCCGCAACTGCTGGCGTGA
PROTEIN sequence
Length: 90
MTPESVMTMGHRAMEISLLLGAPLLLVALVIGLIVSIFQAATQINEATLSFIPKLLAVFATLVIAGPWMLDRMLDYMRALFAGIPQLLA*