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SCNpilot_expt_500_p_scaffold_105_10

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(9003..9473)

Top 3 Functional Annotations

Value Algorithm Source
flagellar motor switch protein FliN n=1 Tax=Variovorax paradoxus RepID=UPI000365DBF8 similarity UNIREF
DB: UNIREF100
  • Identity: 81.4
  • Coverage: 161.0
  • Bit_score: 232
  • Evalue 3.10e-58
flagellar motor switch protein FliN; K02417 flagellar motor switch protein FliN/FliY similarity KEGG
DB: KEGG
  • Identity: 78.6
  • Coverage: 159.0
  • Bit_score: 222
  • Evalue 1.00e-55
Flagellar motor switch protein FliN {ECO:0000313|EMBL:ACS20789.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.6
  • Coverage: 159.0
  • Bit_score: 222
  • Evalue 4.50e-55

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 471
ATGACTGACAACACCTCTTCCGCCAGCAGCGACGCGGACGACTGGGCTGCCGCCCTGGCCGAGCAGACGGCCGCCACCGCGCCCGCACCGGTGCCCGAGCCTGACCCGGCAGCGGCAGCAGCGGTTGCCGCCGCCGTCGCGCCCGCCTCCGCGCAGGTCTTCCAGCAGATCCAGGACACGCCCGCCGCCAATCCCGGCGCGGGCCCCGTGGACATCGCGCGCGTGCTCGACGTGCCGGTGCAGCTGACGGCCGAGATCGGCCGCACCCGCATCACCATCAAGAGCCTGCTGCAGCTGTCGCAGGGCTCGGTGGTCGAGCTCGACGGCCTGGCCGGCCAGCCGCTGGACGTGCTGATCAACGGCTACCTCATCGCCCAAGGCGAAGTGGTGGTGGTGAACGAGAAGTACGGCATCCGCCTGACCGACATCGTCACCCCTTCCGAGCGCATGCAGAAGCTCGCGCGCTCATGA
PROTEIN sequence
Length: 157
MTDNTSSASSDADDWAAALAEQTAATAPAPVPEPDPAAAAAVAAAVAPASAQVFQQIQDTPAANPGAGPVDIARVLDVPVQLTAEIGRTRITIKSLLQLSQGSVVELDGLAGQPLDVLINGYLIAQGEVVVVNEKYGIRLTDIVTPSERMQKLARS*