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SCNpilot_expt_500_p_scaffold_105_18

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(16335..18071)

Top 3 Functional Annotations

Value Algorithm Source
flagellar M-ring protein FliF n=1 Tax=Variovorax paradoxus RepID=UPI000360ACFA similarity UNIREF
DB: UNIREF100
  • Identity: 88.3
  • Coverage: 583.0
  • Bit_score: 992
  • Evalue 1.90e-286
  • rbh
fliF; flagellar MS-ring protein; K02409 flagellar M-ring protein FliF similarity KEGG
DB: KEGG
  • Identity: 72.9
  • Coverage: 583.0
  • Bit_score: 787
  • Evalue 2.20e-225
  • rbh
Flagellar M-ring protein {ECO:0000256|PIRNR:PIRNR004862}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.9
  • Coverage: 583.0
  • Bit_score: 787
  • Evalue 9.90e-225

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1737
ATGAGCACGGCGGCACCCGCCGGCGAGTTGCCGGCGGCCGGAAACGGCCTGCCACCGATCCTGGAACGCCTTCGCGCGCAGCCCAAGCTGCCGCTGATCGTCGGCGGCGCGGCCCTGGTGGCCGCGGCCGCCGCGTTCGCGCTGTGGAGCCGCGGGCCCGACTACAAGGTGCTCTATACCAATGTGTCGGACCGCGACGGTGGCGCGATCATCGCGTCGCTGCAGCAGATGAACGTGCCCTACAAGTTCGCCGAAGGCGGCGGCGCGATTCTGATCGCCGGAGACAAGGTCGCGGAAACGCGCCTCAAGCTCGCGGCCCAGGGCTTGCCCAAGGCCGGCGGCGTCGGCTTCGAACTGATGGACAACCAGAAGTTCGGCACCAGCCAGTTCGCCGAGCAGGTCAATTACCAGCGCGGGCTGGAAGGCGAGCTGGCGCGCTCCATCGAATCGATCGGCAGCATCGAGTCGGCCCGGGTGCACCTGGCGCTGCCCAAGCCCTCGCTCTTCGTGCGCGACCAGAAGAAGCCCTCGGCCTCCGTGGTGCTGAACCTGATGCGCGGACGCAGCATCGACGAAGGTCAGGTCAGCGCCATCGTGCACATGGTCTCCAGCAGCGTGCCCGACCTCGACGCCAAGAGCGTTACGGTGGTCGACCAGCGCGGCAACCTGCTGTCTTCCGCGCGCGGCACCGACCGCGGGCTGGACGTGAGCCAGCTCAAGTATGCGCAGGAGATCGAGCAGAACTACATCCGCCGCATCGAGGCCATCCTGCAACCCATCGTGGGCGCGAACAACGTGCGCGCGCAGGTGGCGGCCGAGATCGATTTCTCGGTGGTGGAACACACCGACGAGAAGTACAAGCCCAACCAGGACCCGGCCCAGGCCGCCGTGCGCAGCCAGCAGTCGAGCGAGTCGGCGCAGCACAACGGCGCCCCGCCCGGCGGCGTGCCCGGCGCGCTGACCAACCAGCCGCCGGTGAACCCGACGGCGCCCATCGTCGGCCCGCGCGCGCCCAATGCCCCCGGCACCCCGCCACCCGGAACGCCTGGCGCGCCCGGCACCCCCGGCGCCCAGGGCGCGACCACCGCCTCCACCGCAGGCGCGGCCACCGGCCCGAGCAGCACCCGCAAGGACACCACCACCAACTACGAGCTCGACCGCACCATCCGCCACGTGCAGCAGGCTGCCGGCGGCGTGAAGCGGCTGTCGGTCGCGGTGGTCGTGAACAACCGCGACGCGACCGATGCCGCTGGCAAGGTCAACAGCCGCGCGCTCACGCCGGCCGAGCTGGAGCAGATCCGCAACCTCGCCAAGGAAGCCATGGGCTTCAGCCAGGACCGCGGCGACTCGCTCAACGTGGTCAACAGCGCCTTCGCCCGCGACGCCGACAGCGGCCCCGCACCCGAAGTGCCGTTCTGGCGCGACCGCGAGAACATCGAGATCGGCAAGACGGTGGGCCAGTACCTGTTCTATGCGCTGCTCGCACTGTTCGCCTGGCTGGCCGTGCTGCGGCCGCTGACGCGCCGCCATGCGCCCGCCGCGCCGACCCCGGTGCCGGTGGCCGAGCAGGAGCCGGCCGTCGAACCCGATGTCAACGCGCAGTCGGCCGAGGAAAGCCTGCGCGAACGCGAGGCCAACCGCAAGAAGGCCGACATGGACTATGCCCACCAGATCGGCGACAAGGATCCCAAACTGGTGGCCGCCCTGATCCAGCACTGGATGAACACCGATGAGTAG
PROTEIN sequence
Length: 579
MSTAAPAGELPAAGNGLPPILERLRAQPKLPLIVGGAALVAAAAAFALWSRGPDYKVLYTNVSDRDGGAIIASLQQMNVPYKFAEGGGAILIAGDKVAETRLKLAAQGLPKAGGVGFELMDNQKFGTSQFAEQVNYQRGLEGELARSIESIGSIESARVHLALPKPSLFVRDQKKPSASVVLNLMRGRSIDEGQVSAIVHMVSSSVPDLDAKSVTVVDQRGNLLSSARGTDRGLDVSQLKYAQEIEQNYIRRIEAILQPIVGANNVRAQVAAEIDFSVVEHTDEKYKPNQDPAQAAVRSQQSSESAQHNGAPPGGVPGALTNQPPVNPTAPIVGPRAPNAPGTPPPGTPGAPGTPGAQGATTASTAGAATGPSSTRKDTTTNYELDRTIRHVQQAAGGVKRLSVAVVVNNRDATDAAGKVNSRALTPAELEQIRNLAKEAMGFSQDRGDSLNVVNSAFARDADSGPAPEVPFWRDRENIEIGKTVGQYLFYALLALFAWLAVLRPLTRRHAPAAPTPVPVAEQEPAVEPDVNAQSAEESLREREANRKKADMDYAHQIGDKDPKLVAALIQHWMNTDE*