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SCNpilot_expt_500_p_scaffold_147_3

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 3683..3895

Top 3 Functional Annotations

Value Algorithm Source
Filamentous hemagglutinin family outer membrane protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V3Y7_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 67.6
  • Coverage: 71.0
  • Bit_score: 87
  • Evalue 7.30e-15
filamentous hemagglutinin family outer membrane protein; K15125 filamentous hemagglutinin similarity KEGG
DB: KEGG
  • Identity: 67.6
  • Coverage: 71.0
  • Bit_score: 87
  • Evalue 2.30e-15
Filamentous hemagglutinin family outer membrane protein {ECO:0000313|EMBL:ADU38106.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.6
  • Coverage: 71.0
  • Bit_score: 87
  • Evalue 1.00e-14

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 213
ATGAATCGCCGTTTGCATCGCGTCGTCTTCAACGCAGCCAGGGGCATGCGAATCGTGGTTCAGGAGACGGCGAACAGCACCGGCAAAGGCGCAAGCAAAACGATTTCCGTAATGCGCGACGCGTTCGCCGGCGCGGCATTGGGGAGCCTGCTGGCGGCCGCCCCGCTCCACGCACAGATCGTGGGTGCACCCAACGTGCCTGGCTCAAATTAA
PROTEIN sequence
Length: 71
MNRRLHRVVFNAARGMRIVVQETANSTGKGASKTISVMRDAFAGAALGSLLAAAPLHAQIVGAPNVPGSN*