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SCNpilot_expt_500_p_scaffold_147_4

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 5579..6922

Top 3 Functional Annotations

Value Algorithm Source
Na+/H+ dicarboxylate symporter n=1 Tax=Variovorax sp. CF313 RepID=J2JIL4_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 95.3
  • Coverage: 449.0
  • Bit_score: 805
  • Evalue 3.30e-230
  • rbh
Variovorax paradoxus strain MEDvA23 contig_12, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ34734.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.3
  • Coverage: 449.0
  • Bit_score: 807
  • Evalue 9.40e-231
sodium:dicarboxylate symporter; K11103 aerobic C4-dicarboxylate transport protein similarity KEGG
DB: KEGG
  • Identity: 94.2
  • Coverage: 448.0
  • Bit_score: 795
  • Evalue 1.10e-227
  • rbh

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1344
ATGCCTCGCTTCGCCAAATCGCTTTTCGGTCAGGTGGTCATCGCGCTGGTGCTCGGCGTGCTCGCGGGGCTTCTTGCGCCCGAGTACGCCGTCAAGCTCAAGCCGCTGGGTGACGGGTTCATCAAGCTGATCAAGATGATCATCCCGGTGCTGGTGTTCTGCGTGGTGGTGCATGGCATCGCCGGCGCGGGAGACCTCAAGCGCGTGGGCCGGGTGGGCGTGAAGTCGCTCATCTACTTCGAGGTGTTGACCACCATCGCTCTGGCGATGGGGCTGGTGCTGGCCTTCGTGTTCCAGCCCGGCGCGGGCATGAATGTCGACCCCGCCAAGCTCGACCCGGCCGCCATGAGCGCCTATGCCTCGAACGCCGACAAGCTCACGAGCGGCGGCACGGTCGAATTCCTCATGAAGCTCATTCCGACCACGGTGGTCAATGCCTTCGCCACCGGCGACGTGCTGCAGGTGCTGCTGTTCGCGGTGCTCTTCGGCTGCGCGCTCACGCTGCTGGGCGATCGCGGCAAGCCGGTGGCGGTGGTGGTCGATGCGCTCTCGCTGGTGCTGTTCAAGATCATGGGCATCATCATCAAGCTGGCGCCGCTGGGTGTGCTGGGCGCCATCGCGTTCACGGTGGGGCAGTACGGCATCGGCTCGCTCAAGCAGCTGGGCATGCTGGTCGCCCTCTTCTACGGCGCGGTGCTGATTTTCGTGTTCGTGGTGCTCGGGCTGGTGATGCGCATGTCGGGCTTCAGCCTGATCAAGCTGCTGCGCTATCTGCGCGAAGAACTCACCATCGTGTTCGCCACCACCTCCTCCGACAGCGTGTTGCCGCAGGTCATGGCCAAGCTGCGCCGCATGGGCATCCGCGATTCGACCGTGGGCCTGGTGATTCCCACCGGCTACTCGTTCAACCTCGACGCCTTCTCGATCTACATCACGCTGGCCGCGGTATTCATTGCACAGGCCACCAACACGCCGATCTCGATGGCCGACCTGCTGACGATCCTGGCGATCGCGCTGGTCACGTCCAAGGGCGCGCACGGCGTGCCGGGCTCGGCCATCGTGGTGCTGGCCGCCACGCTGCACGCGATTCCGGCGATTCCAGCCATTGGACTGGTGCTGGTGCTGTCGGTGGACTGGTTCATGGGCATCGCCCGCGCGCTGGGCAACCTGATCGGCAACTGCGTGGCAACGGTGGCCATCGCTGCCTGGGAAGGCGACATCGACCGCGAACGCGCGCATGCGGTGCTCGACGGCAACTACGCCCCCGAAGCCCTGGATGGCGAGCCGCTGGCCGAGGCCGCGCCCGTGGTAAACACAGGCACCGCCACCACCGCCGCACACTGA
PROTEIN sequence
Length: 448
MPRFAKSLFGQVVIALVLGVLAGLLAPEYAVKLKPLGDGFIKLIKMIIPVLVFCVVVHGIAGAGDLKRVGRVGVKSLIYFEVLTTIALAMGLVLAFVFQPGAGMNVDPAKLDPAAMSAYASNADKLTSGGTVEFLMKLIPTTVVNAFATGDVLQVLLFAVLFGCALTLLGDRGKPVAVVVDALSLVLFKIMGIIIKLAPLGVLGAIAFTVGQYGIGSLKQLGMLVALFYGAVLIFVFVVLGLVMRMSGFSLIKLLRYLREELTIVFATTSSDSVLPQVMAKLRRMGIRDSTVGLVIPTGYSFNLDAFSIYITLAAVFIAQATNTPISMADLLTILAIALVTSKGAHGVPGSAIVVLAATLHAIPAIPAIGLVLVLSVDWFMGIARALGNLIGNCVATVAIAAWEGDIDRERAHAVLDGNYAPEALDGEPLAEAAPVVNTGTATTAAH*