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SCNpilot_expt_500_p_scaffold_147_8

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 9410..10909

Top 3 Functional Annotations

Value Algorithm Source
Putative carotenoid oxygenase n=1 Tax=Variovorax paradoxus B4 RepID=T1XF34_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 89.9
  • Coverage: 497.0
  • Bit_score: 920
  • Evalue 6.10e-265
  • rbh
putative carotenoid oxygenase similarity KEGG
DB: KEGG
  • Identity: 89.9
  • Coverage: 497.0
  • Bit_score: 920
  • Evalue 1.90e-265
  • rbh
Putative carotenoid oxygenase {ECO:0000313|EMBL:AGU51168.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.9
  • Coverage: 497.0
  • Bit_score: 920
  • Evalue 8.50e-265

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1500
ATGGAACGACGCGAACTCCTGCGCCTGCTGGCATCGGCCGGCGCCCTCCCCCTGCTGGCGCCGCTGGCACATGCCGCCACCGGCACCGACGATTGGCAGGCCCAGTTCGAAGCCGCCAGCGCCCCCTGGAAAATCGGCTTCGCCACGCCCGCGGACGACCTGCCGCTCACCCGCGCCACGGTGCGCGGGCGCTTTCCCGATGCCGTGGCCGGCACGCTTTTTCGCATTGGCCCGGCCGGCCACGACCTGGGCGGCGAGCGCTACCACCACTGGTTCGACGGCGACGGCATGGTTCATCGCTTCGTGATCGAAGGGGCCGACGTGCGCCACCAGGGCCGCTACGTGGCCACGCCCAAGCGCGTGGCCGAGGTGCGGGCCGGCCGCCGCCTGTACGAGACCTTCGGCAGCATGCCGCAAGGCGGCGAGCCGCCGACCTCGGCCGACAGCATCAACGTTGCCAACACCAGCGTGCTGCCGCTGCAGGGCGAAGTGCTCGCGCTGTGGGAAGGCGGCTCGGCCACCCGCATCGACGCGCGCACGCTGGACACGCTGGGCGTGAAGACCTGGCGCGCCGACCTCGCCGGCATGCCGTTCTCGGCGCATCCCAAGGTGGACCCGGACGGCACCGTGTGGAACTTCGGCGTCAGCTCCGGCCAGGGCCTGCTGGCGCTGTACGAGATCGCGCCCGAAGGCGCATTGCGCCGCGCGGCCGTGGTGCCGGTGGCCGACATGCCGATGGTCCACGACTTCGCGGTGACCGAGCGGCACCTCGTGTTCCTGCTGCCGCCGCTGGTCTACGACGGCAAGCGCAAGGAAGCCGGCGCGACCTTTCTCGACGCCCACGTCTGGCGGCCCGAACTGGGCATGCGCGCGCTGGTGGTCGACAAGCAGAACTGGGAAAAGCGGCAGATGCTCGAGCTGCCAGCCGGCTTTCTCTTCCACGTGGGCAATGCCTGGGAGGAAGACACGCCGCGCGGCACGCTGATCCATGTCGACTACGTGCGTTCGGACAACGCCGAGTCGGTGTTCATCAGCAACCGCGAAGTGATGCGCGCGCGCCGCGTGAGGGGCCCCGACCCGCACCTGACCGTGGCCACCCTGAACCTCGGCACCGGCAGGGCCACGCAGGCGACGCTCGCGCAGGAGGCCGAGTTCCCGCGCATCGACCCGCGCCGCGTCGGCCTGCGTCACCGCCAGGTGGTGCATGCCACGCAGATCCGGCCCGACCTGCCGGGCTTCGGCGCGGTCGCGCGCACCCACGTCGAGACCGGCCGCAGCCAGCGCTTCAGCTACGGCCCGCAGGCCATCGTGGAAGAACACGTCTATGTGCCGGACGGCTCGAAGCCGGGCTGGGTGCTGGGCACCGTGCTCGACTTCGGCCGGCAGAAGACGGTGCTGTCGTGCTTTGCGGCCGATCACCTGGCGGCGGGACCGGTGGCGCAGGCCACGCTGCCCTATGCGCTTCCGTTGGGCCTTCACGGGGTCTTCGTGCGGACCTGA
PROTEIN sequence
Length: 500
MERRELLRLLASAGALPLLAPLAHAATGTDDWQAQFEAASAPWKIGFATPADDLPLTRATVRGRFPDAVAGTLFRIGPAGHDLGGERYHHWFDGDGMVHRFVIEGADVRHQGRYVATPKRVAEVRAGRRLYETFGSMPQGGEPPTSADSINVANTSVLPLQGEVLALWEGGSATRIDARTLDTLGVKTWRADLAGMPFSAHPKVDPDGTVWNFGVSSGQGLLALYEIAPEGALRRAAVVPVADMPMVHDFAVTERHLVFLLPPLVYDGKRKEAGATFLDAHVWRPELGMRALVVDKQNWEKRQMLELPAGFLFHVGNAWEEDTPRGTLIHVDYVRSDNAESVFISNREVMRARRVRGPDPHLTVATLNLGTGRATQATLAQEAEFPRIDPRRVGLRHRQVVHATQIRPDLPGFGAVARTHVETGRSQRFSYGPQAIVEEHVYVPDGSKPGWVLGTVLDFGRQKTVLSCFAADHLAAGPVAQATLPYALPLGLHGVFVRT*