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SCNpilot_expt_500_p_scaffold_147_15

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 18046..19302

Top 3 Functional Annotations

Value Algorithm Source
Variovorax paradoxus strain MEDvA23 contig_12, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ34724.1}; EC=1.1.1.40 {ECO:0000313|EMBL:KIQ34724.1};; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.5
  • Coverage: 418.0
  • Bit_score: 790
  • Evalue 1.50e-225
malic protein NAD-binding protein; K00029 malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] similarity KEGG
DB: KEGG
  • Identity: 95.5
  • Coverage: 418.0
  • Bit_score: 789
  • Evalue 5.50e-226
Malic protein NAD-binding protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UW83_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 95.5
  • Coverage: 418.0
  • Bit_score: 789
  • Evalue 1.80e-225

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1257
ATGAAGCTGGCCTGCGTGCGCGAGATCGCCGACCTGACCAAGGCCGACATCAGCGAAGAGGTGGCCACCGCCTACGCCGGCCAGGAACTGGCCTTCGGCCCCGACTACATCATTCCCAAGCCCTTCGACTCGCGCCTGATCCTGCGCATCGCGCCGGCCGTGGCCAAGGCGGCCGCCGCCTCCGGCGTGGCCACGCGCCCGATCGAGGACATGGACGCCTACCGCCAGCACCTGACGCGCTTCGTCTACCAGACCGGCATGTTCATGCGCCCGGTGTTCAGCGCCGCCAAGATCGCCGCCGCCAAGCGCGTGGCGTATGCCGAGGGCGAGGACGAGCGCGTGCTGCGCGCCGCGCAACTGGCCGTCGACGAAGGCCTGGCGCAGCCGATCCTGGTCGGCCGCCCCGCGGTGATCGAGGCGCGCATCAAGAAGGCCGGCCTGCACATCCGCGTGGGCACCGACGTGGAAGTGGTCAACCCCGAGGACGATCCGCGCTTTCGCATCTACTGGGAGAGCTTCCACAAGCTCATGGGCCGCCGCGGCGTCACGCCCGAGGCCGCCAAGACGATGGTGCGCCGCTCCAACACCATCATCGCCGCGCTGATGCTGCACCTGGGCGACGCGGACGCCATGATCTGCGGCCTGGTCGGGCGCTTCGACGTGCACCTGGAGCACATCCGCAACCTGATCGGCCTGAAGCGCGGCGCGCCGGGCTTCGCGACGCTGAACGCGCTCACGCTGGAAAAGCGCACCGTCTTCATCACCGACACCAACGTGAACGAAGACCCGAGCGCCGAGCTGCTGGCCAGCATCGCCATGATGGCCGCCGAGGAAGTGCGCCGCTTCGGCCTGCCGCCCAAGGTGGCCTTCCTCTCGCACTCGAACTACGGCACCTCCAGCCGCGGCTCGGCACGCAAGATGCGGCTGGCGCGCGACCTGTTCGCGCAGATGGCTCCGGACATCGAATGCGACGGCGAGATGCACGGCGACTCGGCGCTATCGGAAGAAATCCGCCGCACCGCCCTGCCCGAGACCACGCTCACCGGCGAAGCCAACCTGCTGGTGTGCCCGAACCTGGACTCGGCGCACATCCTGTACAACGTGCTGAAGATGACCGGCGCCAACGGCATCACGGTCGGCCCGATCCTGCTTGGCGCGGCAGGCTCGGCGCATGTGCTGACGCCCACGTCGACCGTGCGCCGCATCGTCAACATGACGGCGCTGGCCGTGGCGAATGCGACGACGGCACTGAAGTAA
PROTEIN sequence
Length: 419
MKLACVREIADLTKADISEEVATAYAGQELAFGPDYIIPKPFDSRLILRIAPAVAKAAAASGVATRPIEDMDAYRQHLTRFVYQTGMFMRPVFSAAKIAAAKRVAYAEGEDERVLRAAQLAVDEGLAQPILVGRPAVIEARIKKAGLHIRVGTDVEVVNPEDDPRFRIYWESFHKLMGRRGVTPEAAKTMVRRSNTIIAALMLHLGDADAMICGLVGRFDVHLEHIRNLIGLKRGAPGFATLNALTLEKRTVFITDTNVNEDPSAELLASIAMMAAEEVRRFGLPPKVAFLSHSNYGTSSRGSARKMRLARDLFAQMAPDIECDGEMHGDSALSEEIRRTALPETTLTGEANLLVCPNLDSAHILYNVLKMTGANGITVGPILLGAAGSAHVLTPTSTVRRIVNMTALAVANATTALK*