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SCNpilot_expt_500_p_scaffold_61_13

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(9722..10723)

Top 3 Functional Annotations

Value Algorithm Source
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein; K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95] similarity KEGG
DB: KEGG
  • Identity: 86.3
  • Coverage: 329.0
  • Bit_score: 555
  • Evalue 1.40e-155
  • rbh
Phosphoglycerate dehydrogenase-like oxidoreductase n=1 Tax=Variovorax sp. CF313 RepID=J3CX83_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 87.2
  • Coverage: 329.0
  • Bit_score: 569
  • Evalue 3.00e-159
  • rbh
Variovorax paradoxus strain MEDvA23 contig_75, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ23355.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.1
  • Coverage: 329.0
  • Bit_score: 574
  • Evalue 1.00e-160

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1002
ATGACCACGGTTTTCGTCAGCCATCCGCAGAGCAAACTTGCCCACTATTTCGGCGACCGCGCGGCCGCGGCCCTGCGGGCCATCGCGCAGGTGCGCTTCAACCCCACCGACACCGACCTGTCGTCCGCCCGGCTCGCGGAGCTGGCGCAAGACTGCGACGCCATCATTTCCTACCGCCAGACGGCGGGCGACGAGGCGCTGTTCGCGGCGCTGCCGCAACTCAAGGCCTTCGTGCGCTGCGCCATCGACATCCGCAACATCGACGTGGCCTCGGCCAGCCGGCACGGCGTGCTGGTGACGCAGGCGAGCGCGGGGTTCATCCCTTCGGTGTCGGAGTGGATCGTGGGCGTGATGATCGACCTGGGCCGCCACATCAGCGCGTCGAGCGCGCTGTACCACGCGGGGCAGGCCGCGCCGCCGGTGATGGGGCGCGAGCTGCGCGGCAGCACGCTGGGCGTGATCGGCTACGGTCAGATCGGCCGCTACCTGTGCGACGTGGCACTGGCGCTGGGCATGCGCATCGTGGTGCACGATCCGCACACGGCCACGGAGCGCGCGGAGTTCGTGCAGGTGGGCTTCGATGACTTGCTCGCGCAATCGGACTTCGTCGTCTGCCTGGCCGCGGCCACCGAGGCGACCGAGAACCTGATGAATGCCGCGGCCTTCGCGCGGATGCGGCCCGGTGCGTTTTTCATCAACGCGTCGCGCGGCAACCTCGTCGATGAAGACGCGCTGCTTGCGGCGCTCGATGCCGGCACCATCGCCGGCTGCGCGCTCGACGTGGGCCGTGCGCCCGACCAGATGCCGTCGCCGCGCGTGGCGGCGCATCCGCGCGTGATCGCGACGCCGCACATCGGCGGGCTCACGCCGCCGGCGGTGGAGCACCAGGCGATGGAAACCGTGTCGCAACTGGCCGAGATCTTCCAGGGCAGGGCGCCCAAGGGAGCGGTGAACGCGGCCGAAGCCTACCGCTGGCAGCGGGCCTTCGTCGCCGAGGCCTGA
PROTEIN sequence
Length: 334
MTTVFVSHPQSKLAHYFGDRAAAALRAIAQVRFNPTDTDLSSARLAELAQDCDAIISYRQTAGDEALFAALPQLKAFVRCAIDIRNIDVASASRHGVLVTQASAGFIPSVSEWIVGVMIDLGRHISASSALYHAGQAAPPVMGRELRGSTLGVIGYGQIGRYLCDVALALGMRIVVHDPHTATERAEFVQVGFDDLLAQSDFVVCLAAATEATENLMNAAAFARMRPGAFFINASRGNLVDEDALLAALDAGTIAGCALDVGRAPDQMPSPRVAAHPRVIATPHIGGLTPPAVEHQAMETVSQLAEIFQGRAPKGAVNAAEAYRWQRAFVAEA*