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SCNpilot_expt_500_p_scaffold_61_26

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(24745..26103)

Top 3 Functional Annotations

Value Algorithm Source
Arabinose efflux permease family protein n=1 Tax=Variovorax sp. CF313 RepID=J2TNQ4_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 94.9
  • Coverage: 447.0
  • Bit_score: 822
  • Evalue 2.70e-235
  • rbh
Arabinose efflux permease family protein {ECO:0000313|EMBL:EJL80347.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.9
  • Coverage: 447.0
  • Bit_score: 822
  • Evalue 3.70e-235
major facilitator superfamily protein; K08169 MFS transporter, DHA2 family, multidrug resistance protein similarity KEGG
DB: KEGG
  • Identity: 94.4
  • Coverage: 450.0
  • Bit_score: 818
  • Evalue 9.20e-235
  • rbh

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1359
ATGCTGGTCATCATCCTCGGGCTGATCGTTTCGGTGCTCGACGGCACCATCGTCAACCTGGCGCTGCCGGGCATCGCGCGCGAGCTGCAGGCCAGCCCGTCGCAGGCGATCTGGGTGGTCAATGCGTACCAGATCGCCACGCTGGTCATGCTGCTGCCGCTGGCTTCGCTGGGCGACCTGGTCGGCTACCGGCGGGTGTACCTCGTGGGGCTGGCGGTGTTCACGCTGTCGTCGCTGGCCGCCACCTTCGCCAATTCGCTGGCCACGCTGACGGCGGCGCGTGCCTTCCAGGGGCTGGGCGCGGCCGGCATCATGAGCGTGAACGCGGCGCTGGTGCGGCTGACGTATCCCTCGTCGCAACTGGGCAAGGGCATGGCGCTGAATTCGCTGGTGGTCGCCACGTCGTCGGTGGCGGGGCCTTCGGTGGCGGCGGCCATTCTTTCGGTGGCTTCGTGGCCGTGGCTCTTCGCCATCAACGTGCCGCTGGGCATCGTCACCTTCGCGCTGGGCATGCGGGCGCTGCCGTTCAACCGGGTGGCACCGGCCGCCGGGCTGCGCTTCTCGCCGGTGGACGTGGGGCTCAACGTGCTGATGTTCTCGCTGGTCTTCCTGGGCGTGGACCGGCTGGGCGTGCGCGAAGGCCCGGTGCAGGGCGCCGGCGGCTCGCAGGCCTCGGCCTGGGGCATCCTGCTGGCCGGGCTGGCGGTGGGCTTCGTCTACCTGCGGCGGCAACGCAAGCAGGCGGTGCCGCTTTTCCCGATCGACCTGCTGCGCATTCCGGTGTTCGCGCTGTCGATGGGCACTTCCGTGGCCGCCTTCTGCGCGCAGATGCTGGCCTACATCGCGCTGCCGTTCCTGCTGCTCGACGCCTATGGCCGCAGCCACATCGAGGCCGGCCTGCTCATCACGGCGTGGCCGCTGGGCATCGTGGTCATGGCGCCCATTGCCGGGCGGCTGATCGGCCGCTATCCCGACGGGCTGCTGGGCGGCATCGGCCTGGCCCTGCTGGCCAGCGGGCTGGCACTGCTGGCGGCGCTGCCGGCGCACCCGGGCAATGCCGACATCGCCTGGCGCATGGCGCTGTGCGGGCTGGGCTTCGGGCTGTTCCAGTCGCCCAACAACCACACCATCGTGACTTCGCCGCCGGCGCACCGCAGCGGTGCGGCCAGCGGCATGCTGGGCACCGCCCGGCTGACCGGGCAGACGCTGGGCGCCGTGGTGCTGGCGGCGGTCTTCAGCCTCTGGAGCCCGCACGGCGGCCACGGCCCGGTGGTGGCGCTGGTGCTGGCGGCCTGCTGCGCGGCGGTGGCGGCGGTCTTCAGCAGCTTGCGCCTCAAGACGACAAAACCGGGCGGCTGA
PROTEIN sequence
Length: 453
MLVIILGLIVSVLDGTIVNLALPGIARELQASPSQAIWVVNAYQIATLVMLLPLASLGDLVGYRRVYLVGLAVFTLSSLAATFANSLATLTAARAFQGLGAAGIMSVNAALVRLTYPSSQLGKGMALNSLVVATSSVAGPSVAAAILSVASWPWLFAINVPLGIVTFALGMRALPFNRVAPAAGLRFSPVDVGLNVLMFSLVFLGVDRLGVREGPVQGAGGSQASAWGILLAGLAVGFVYLRRQRKQAVPLFPIDLLRIPVFALSMGTSVAAFCAQMLAYIALPFLLLDAYGRSHIEAGLLITAWPLGIVVMAPIAGRLIGRYPDGLLGGIGLALLASGLALLAALPAHPGNADIAWRMALCGLGFGLFQSPNNHTIVTSPPAHRSGAASGMLGTARLTGQTLGAVVLAAVFSLWSPHGGHGPVVALVLAACCAAVAAVFSSLRLKTTKPGG*