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SCNpilot_expt_500_p_scaffold_61_27

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(26206..27396)

Top 3 Functional Annotations

Value Algorithm Source
Drug resistance transporter, Bcr/CflA subfamily n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V902_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 95.5
  • Coverage: 396.0
  • Bit_score: 730
  • Evalue 1.20e-207
  • rbh
Bcr/CflA subfamily drug resistance transporter; K07552 MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein similarity KEGG
DB: KEGG
  • Identity: 95.5
  • Coverage: 396.0
  • Bit_score: 730
  • Evalue 3.80e-208
  • rbh
Variovorax paradoxus strain MEDvA23 contig_75, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ23365.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.5
  • Coverage: 396.0
  • Bit_score: 730
  • Evalue 1.30e-207

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1191
ATGGCCCTGCTGCTGGGCCTGCTCTCGGCCATCGGGCCTTTCGCCATCGACATGTACCTGCCGGCGCTGCCGGCCATCGGCCAGAGCCTGCATGCCGACATCGGCGCGGTGCAGATGAGCCTCACGGCGTTCTTCCTCTCGCTGGGCGCGGGCCAGCTTCTGTACGGCCCGATCTCCGACATGGTCGGGCGCAAGCCGCCGCTGTATGCCGGGCTGGTGCTGTTTGCGCTGGCGAGCGTGGGCTGCGCCGTTGCCACCGACATCCAGACGCTGATCGTGCTGCGCTTCGTGCAGGGCCTGGGCGCCGCCGCCGGCATGGCGATTCCGCGCGCCGTGGTGCGCGACCTGCACACCGGCACCGACGCAGCGCGGCTGATGTCGCTGCTGATGCTGGTGTTCAGCGTGTCGCCGATCCTTGCGCCGCTGGCGGGCAGCGCGGTCATCGCATTCGCCGGCTGGCGCGGCGTGTTCTGGGCCGTGACCATCGCCGCGGTGGCGGGGCTGGCCATGATGGTCAAGCTGCTCGACGAGACGCGCCCGGCCTCCGAGCGCGTGGAAAGCAGCCTGGGCAGCGCGCTCGCGGCCTACTGGCTGCTGCTGCGCGACCGTCACTACCTCGGCCTCGTGTTCATCGGCAGCTTCGCGATGGCGGGCTTCTTCACCTACCTGGCCAATTCGTCCTTCGTGATGATCGACCACTACGGCCTGTCGCCCGCCATGTACAGCGTGGCCTTCGGCGTGAACGCCGCGGCCTTCATCGCGGCGTCGCAGTTCACCGGCTCGCTGGGCGAGCGCTACGGGCTGGTCAACCTGGTGAAGTTCGGCGTGGTCTGCTGCGGCGTGGCGATGGTCGCGATGTTCATTTACTTCGCGACGGGCGGCGACAACATCTGGGTGCTCATCGTTCTCTACTTCATCGCCTCGGGCTTCATGGGGCTGGTGATTCCGACCACCGGCGTGCTGGCGCTCGAGATGCACGGCGCCATCGCGGGTACCGCCTCGGCGCTGCTCGGCACGCTGCAGATGCTGACGGGCGCGCTGGCCATGGCGGTGGTGGGCCTCTTTACCGACGGCCGTCCGCTGCCGATGGTGGCCGGCATGGCCGCCGGCGCGCTGATCGCGCTCGTGCTGACCTGGCTCACGCTGGGCGGCGTGCGCTCCGAGCCCGCCGCGCGGGCGCAACAGGCCTGA
PROTEIN sequence
Length: 397
MALLLGLLSAIGPFAIDMYLPALPAIGQSLHADIGAVQMSLTAFFLSLGAGQLLYGPISDMVGRKPPLYAGLVLFALASVGCAVATDIQTLIVLRFVQGLGAAAGMAIPRAVVRDLHTGTDAARLMSLLMLVFSVSPILAPLAGSAVIAFAGWRGVFWAVTIAAVAGLAMMVKLLDETRPASERVESSLGSALAAYWLLLRDRHYLGLVFIGSFAMAGFFTYLANSSFVMIDHYGLSPAMYSVAFGVNAAAFIAASQFTGSLGERYGLVNLVKFGVVCCGVAMVAMFIYFATGGDNIWVLIVLYFIASGFMGLVIPTTGVLALEMHGAIAGTASALLGTLQMLTGALAMAVVGLFTDGRPLPMVAGMAAGALIALVLTWLTLGGVRSEPAARAQQA*