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SCNpilot_expt_500_p_scaffold_61_30

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(29709..30506)

Top 3 Functional Annotations

Value Algorithm Source
short-chain dehydrogenase n=1 Tax=Variovorax paradoxus RepID=UPI00037ACEAF similarity UNIREF
DB: UNIREF100
  • Identity: 86.8
  • Coverage: 234.0
  • Bit_score: 387
  • Evalue 9.80e-105
  • rbh
Variovorax paradoxus strain MEDvA23 contig_75, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ23421.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.8
  • Coverage: 243.0
  • Bit_score: 417
  • Evalue 1.60e-113
short chain dehydrogenase/reductase family oxidoreductase similarity KEGG
DB: KEGG
  • Identity: 66.5
  • Coverage: 260.0
  • Bit_score: 333
  • Evalue 6.90e-89
  • rbh

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 798
ATGGCTGTCACCTCCGTCACTCCCTCCGTTTCTTCGTCGCGAACCGATCCGCCGCCGGTTGCCTGGATCGCCGGTGTCGGCGCCAGCGCCGGCCTGGGTGCCGCATTGGCGCGGCGCTTCGCGGCTGAAGGCTTCATCGTCGCGCTGACCGGGCGCACCCAGTCCCAGCTCGATGCGGTGGCCGCGGAAATCGCGGCGTCGGGCGGGCGCGCGCATGCGTTCGCGGGCGACGTGGCAAGCGAGGCCGAGATCCACGGCATCGCGCAGAAGGCGAGGGCGCTGGGGCCGCTCACCGTGGCCATCTTCAATGCGGCGAGCGCGGTGCGCGCGCCGACGCTGGAGCTGTCGGTCGAGCAGTTCACGCAGGCCTGGCGCACCAGCGCGCTGGGCGGTTTCATCTTCGGGCACGAGGCCCTGCGCGGCCTGCTGGCCAACAGCTTCGAGGCCGATGGCTCGCGCGGGCGCGGCACGCTGCTGTTCACCGGCGCCACGGCAGCGCTGCGCGGCAAGCCGCCGTTCGCGGCCTTTGCCGCGGCCAAGGCCGCCTTGCGTTCGCTGAGCCAGAGCCTGGCGCGCGAGTTCGGCCCGCAGGGCGTGCACGTGGCGCATGTGGTGATCGACGGCGGCATCGACGGCGAGCGGCTGCGCACCGGCGCGCCGCAGCGCGTGGCGCAGGCCGGCGGCGACGGGCTGCTGCAGCTCGAGGCCATCGCCGAAAGTTACTGGCAGCTGCATGTGCAGCACCGCAGCGCATGGACGCAGGAACTCGACCTGCGCCCCTTCAAGGAGCCGTTTTGA
PROTEIN sequence
Length: 266
MAVTSVTPSVSSSRTDPPPVAWIAGVGASAGLGAALARRFAAEGFIVALTGRTQSQLDAVAAEIAASGGRAHAFAGDVASEAEIHGIAQKARALGPLTVAIFNAASAVRAPTLELSVEQFTQAWRTSALGGFIFGHEALRGLLANSFEADGSRGRGTLLFTGATAALRGKPPFAAFAAAKAALRSLSQSLAREFGPQGVHVAHVVIDGGIDGERLRTGAPQRVAQAGGDGLLQLEAIAESYWQLHVQHRSAWTQELDLRPFKEPF*