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SCNpilot_expt_500_p_scaffold_117_4

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(2699..3052)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000375CE5A similarity UNIREF
DB: UNIREF100
  • Identity: 78.3
  • Coverage: 120.0
  • Bit_score: 183
  • Evalue 1.20e-43
Variovorax paradoxus strain MEDvA23 contig_87, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ21491.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.5
  • Coverage: 117.0
  • Bit_score: 171
  • Evalue 5.30e-40
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 73.5
  • Coverage: 117.0
  • Bit_score: 169
  • Evalue 5.90e-40

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 354
ATGAGAGTCCGTACCGTCACCCTGTGCATCGCCGCTGTGCCCGCGCTGGTGCTGGCCTCGTTCGCGCATGCGAGCGGGCGCGCCGATCCCGACTATCCGCAGATGTCGCACTCGACCCAGTCGCGCGATGCGGTGTCAGCGGATGCGGTGCGCGCCAACAACGGCATCCACGCCACCGAGGTCCTCGAATCGCAGCCCGCGCCGGCCGTGAACGGCCTGGACCGCGCACAGGTGCAGGCCGCCGCGATCCGCGCCAACACCGGCATCCATCCGACGGAGATCATGGAGTCGCAGGTGGCACCGCCGGTGGCGTCGGCGAACCTGCCGAACACTTCGAGCGCATCCGGCGAATGA
PROTEIN sequence
Length: 118
MRVRTVTLCIAAVPALVLASFAHASGRADPDYPQMSHSTQSRDAVSADAVRANNGIHATEVLESQPAPAVNGLDRAQVQAAAIRANTGIHPTEIMESQVAPPVASANLPNTSSASGE*