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SCNpilot_expt_500_p_scaffold_117_8

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(5243..6247)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J2KJ91_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 92.5
  • Coverage: 334.0
  • Bit_score: 619
  • Evalue 2.50e-174
  • rbh
Transcriptional regulator {ECO:0000313|EMBL:EJL73153.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.5
  • Coverage: 334.0
  • Bit_score: 619
  • Evalue 3.50e-174
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 91.6
  • Coverage: 332.0
  • Bit_score: 598
  • Evalue 1.50e-168
  • rbh

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1005
ATGAACTTCACCTTCAAGCAGCTGGAGGCCTTTCTCTTCAGCGCCAAGCTCCAGAGCTTCAGCGCCGCGGCGGTGAAGCTGCACACCACGCAGTCGGCCATCTCCAAGCGGCTGGCGGAGCTGGAGGAATCGCTGGGCGGCCCCTTGCTGCATCGCACCTCGCACGGGCTCGAACTGGCGCAGGCCGGCCGCGAGCTGCTGTCGCTCGCGGAAGAGGCGCAGCGGCTCTGGCAGCGCATCCAGCACGACATCAGCGTCGACAAGACACTGCGCGGCACCTTCCGCGTGGGCGTGACGGAGCTGATCGCCATGACCTGGCTCACCAGCCTCATACAGCTGCTGCAGAAGCTGCATCCCGAGGTAACGCTCGAGCCGGTGGTCGACGCGGGGCTCACGCTCTTCGAGCGGCTGGAGGCCAACAAGCTCGACCTGTCCATCATGCCGGGCATCTTCTGGGGGCAGGCCTTCGAGTCGATCAAGGTGGGGCAGGTCGACCAGGCCTGGATCGCGAGTCCGCGCCTGGGCGTTCCCAACCGGGCGCTGAAGCCGCACGAGTTTGCCGACTACCCGGTGATCGAGCAGCCCGCCGGCGCCTCGAAGAATCGGTTCTATGAAGCCTGGCGCGCGGAGCACGGCTTTCGCTTCGGCAAGGTCATGCTGACCAACAGCACGACGGTGCTGCGCGAGCTGACGATCAGCGGCTTCGGCATCAGCCAGCAGGCGCTCGACTATGTGCGCCCCGACATCAAGAGCGGCCTGCTGCGCATCGTGCGGACCGACCCCATGCCGCCGCCGCTGGTCTACAGCGCGGTCTACCGGCGCGACAACGCCAGCCCCGCGCTGGCGCGCATCGTCGAACTGGCGGTGAAGACCTGCGACTTCACCTTGCGGGCCAGCCAGCACGACGTGGCGCCGCCGCGTCCGCCGCGTGGTTCAGGCGCGACCCTGCGGCAGCGCGCGATTCGCCAGGCCGCGAAGAAGCCGGCCAGGAAGAGCAGGAGATAA
PROTEIN sequence
Length: 335
MNFTFKQLEAFLFSAKLQSFSAAAVKLHTTQSAISKRLAELEESLGGPLLHRTSHGLELAQAGRELLSLAEEAQRLWQRIQHDISVDKTLRGTFRVGVTELIAMTWLTSLIQLLQKLHPEVTLEPVVDAGLTLFERLEANKLDLSIMPGIFWGQAFESIKVGQVDQAWIASPRLGVPNRALKPHEFADYPVIEQPAGASKNRFYEAWRAEHGFRFGKVMLTNSTTVLRELTISGFGISQQALDYVRPDIKSGLLRIVRTDPMPPPLVYSAVYRRDNASPALARIVELAVKTCDFTLRASQHDVAPPRPPRGSGATLRQRAIRQAAKKPARKSRR*