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SCNpilot_expt_500_p_scaffold_117_17

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 16558..17937

Top 3 Functional Annotations

Value Algorithm Source
sensor protein (EC:2.7.13.3); K07649 two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] similarity KEGG
DB: KEGG
  • Identity: 54.1
  • Coverage: 447.0
  • Bit_score: 437
  • Evalue 4.50e-120
  • rbh
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.1
  • Coverage: 447.0
  • Bit_score: 437
  • Evalue 2.00e-119
Sensor protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HPY4_RUBGI similarity UNIREF
DB: UNIREF100
  • Identity: 54.1
  • Coverage: 447.0
  • Bit_score: 437
  • Evalue 1.40e-119
  • rbh

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Taxonomy

Rubrivivax gelatinosus → Rubrivivax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1380
ATGAGCACGGTGCGCCGCGCATGGTGGCTGCAGCGCGACCTGCTCGTCTGGCTGATGCTGCCGCTGCTCGCGGTGGTGGCGGCCACCGGCGCGGTCGGCACCTTCACCGCGCAGCGCCTGACGGACAAGGCCTTCGACCGCTGGCTGCTCGACACCGCTCGCTCGGTGGCCGCGCAGGTGCGCTTCCCAGACGGGCACGCCCATCTCGACCTGCCCGCCGCGACCGAGGCCGTGCTGGGCTACGACGAGATCGACCAGGTCTATTTCAGCGTGAGCGAGGCCGGCCAGCTCCTGGCCGGGCAGCACGGCATTCCGCACACCGGCACCCGGCATGCCAGCTACCGCGCCGGCGAGGCCTTCGACGCCTTCTATGCGGGCCATGCGGTGCGCGTGGCGGCGGCAAGAATTCCGGGCGCGAGCGAAGACAGCAAGGTGCTGGTGCTGGTGGCCGAGACCACCCGCAAACGGCAACGCGCACAGAACGAGGTGCTGATGATGCTGGTGCCCGTGGGCGCGCTGCTGCTGGCCGCCGCGGCCGCCATCGGCTTCGCGGTGCGCCGCACGCTCAACCCGCTGGAGGCCATCGCGGCGCGCTGGAACGAGCGCTCGCATGCCTCGCTGCAGCCCATTGCCGCCGACGACATGCCGCGCGAGCTGATGCCCTTTGCCACCGCGCTGAACGACCTGCTCGCGCGCATCCGCGCCATGCTCACCCGCGAGCAGCAGTTCGCGGCCACGGTGGCGCACCAGCTGCGCACGCCGCTCGCCGGCCTGCAACTGGGCGTGACCCGCGCCGCCGAGGCCGGCGACCTGGAGAGCAGCCGGCAGGTGCTGGGCGAGCTGGGCAACACGGTGCAGCGCACCGCGCGCATGGTGCAGCAGTTGCTCGCGCTCGGCAGGCTCGACCCCGAGGTGCGCGGCAACCTGAGCTTCGTGCCCACCGACCTTGCGGCGCTGGCGCACGACGTGGGCAGCACCTTCCTGGAGTTCGCGGCCTCGCGCTCGATCACGCTGGAACTCGATGCACCCGCCGAGCCTGTGATGGTGCGACTGCAGCCCGAGCTGTTCAGCGAAGCACTGGGCAACCTGCTGGACAACGCGCTGCGCTACACGCAGGAAGGCGGCGCTGTGCTGATCGGGTTCGACACGTCGCCGCCCTCGATCCGCGTGTCCGACAACGGGCCCGGCGTGCCGAAGGAGCTGTACGAGGCGGTGTTCGAGCGCTTCGTGCGCGGACAGCATGTGGCCGGAGAAGGCAGCGGGCTCGGGCTGGCGATCGTGCGCGACATCGCGGCGCTGCATGGCGCCACGGTCACGCTGTCGCAGGGTGCGCTGGGCGGGGCCTGCGTGACCATCCGCTTCGCGCAGGCGGAGGTCTGA
PROTEIN sequence
Length: 460
MSTVRRAWWLQRDLLVWLMLPLLAVVAATGAVGTFTAQRLTDKAFDRWLLDTARSVAAQVRFPDGHAHLDLPAATEAVLGYDEIDQVYFSVSEAGQLLAGQHGIPHTGTRHASYRAGEAFDAFYAGHAVRVAAARIPGASEDSKVLVLVAETTRKRQRAQNEVLMMLVPVGALLLAAAAAIGFAVRRTLNPLEAIAARWNERSHASLQPIAADDMPRELMPFATALNDLLARIRAMLTREQQFAATVAHQLRTPLAGLQLGVTRAAEAGDLESSRQVLGELGNTVQRTARMVQQLLALGRLDPEVRGNLSFVPTDLAALAHDVGSTFLEFAASRSITLELDAPAEPVMVRLQPELFSEALGNLLDNALRYTQEGGAVLIGFDTSPPSIRVSDNGPGVPKELYEAVFERFVRGQHVAGEGSGLGLAIVRDIAALHGATVTLSQGALGGACVTIRFAQAEV*