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SCNpilot_expt_500_p_scaffold_117_25

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 24805..28197

Top 3 Functional Annotations

Value Algorithm Source
Signal transduction histidine kinase n=1 Tax=Variovorax sp. CF313 RepID=J2JZ66_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 95.8
  • Coverage: 999.99
  • Bit_score: 2146
  • Evalue 0.0
  • rbh
Signal transduction histidine kinase {ECO:0000313|EMBL:EJL73165.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.8
  • Coverage: 999.99
  • Bit_score: 2146
  • Evalue 0.0
integral membrane sensor hybrid histidine kinase similarity KEGG
DB: KEGG
  • Identity: 95.1
  • Coverage: 999.99
  • Bit_score: 2117
  • Evalue 0.0
  • rbh

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3393
ATGCAATCCGTCTCCGGACAGAAGATCTTCCGCATCCGCCGCGACTACAACGCCTGGGTCGCGAACGAGACGCTGGAGGACTACGCGCTGCGCTACACGCCGCGCAGCTTCCGCAAGTGGTCGGAGTTCCGCGTGGCCAACGCGGCCTTCGGCGCGACCTCGTTCCTGGCGCTGGAGGCCATCGGCGGGGCCATCGCGCTGAGCTACGGCTTCTCGAACGCGCTGTGGGCGATCCTCGTGGTCGGGCTCATCACCTTCCTCACGGGCCTGCCGATCTCGTACTACGCGGCGCGCCACGGCGTGGACATGGACCTGCTCACGCGCGGCGCGGGCTTCGGCTACCTGGGCTCCACGCTCACCTCGCTGATCTACGCGAGCTTCACCTTCATCTTCTTCGCGCTGGAGGCGGCCATCCTCGCGCTGGCGCTGCAGATGTACCTGGACTGGCCGCTGTGGCTGCTGTACCTGGTGTCGTCGATCGTCATCATCCCGCTGGTGGCGCGGGGCATCACGCTCATCTCGGGGCTGCAGCTGTGGACGCAGCCGATATGGATCGTGCTGTTCGTCTGCCCCTTCATCGCGGTGCTGGTGAAGAAGCCCGAGCTGTATGCCGACTTCACCGGGCTGGTGGGCCGCACTTCCGACAGCAGCGGCTTCGACCCGCTGATGTTCGGCGCCGCCGCCACCGTGGCGTTTTCGCTGGTGGTGCAGATAGGCGAGCAGGTCGACTACCTGCGCTTCTTGCCCGAGAAGACGGCCGCCAACCGCGTACGCTGGTGGACGGCGGTGCTGGTCGCCGGGCCGGGCTGGATCGTGCCGGGCATGCTGAAGATGATGGGCGGCGCCTTCCTCGCCTTCCTGGCGCTTCAGCACGAGATACCGGCCGTGCATGCGATCGAGCCCACGCAGATGTACCTCACGGGCTTCTCGTACGTGCTGCGCGACCCGGCCTGGGTGCTGGGCGTGACGGTGCTGTTCGTGGTGGTCTCGCAGATGAAGATCAACCTGACCAACGCCTATGCAGGCTCGCTCGCGTGGTCGAACTTCTTCGCGCGGCTCACGCACAGCCACCCGGGGCGCGTGGTGTGGCTGGTGTTCAACGTGGTCATCGCGATACTGCTGATGGCGCTGGGCGTGTTCGCGGCGCTGGAGCATGTGCTGGGCTTCTACAGCAACATCGCCATTGCCTGGGTCGGCGCGCTGGTGGCAGACCTCGTCATCAACAAGCCGCTGGGCTGGAGCCCGAAGACCATCGAGTTCAAGCGCGCGCACCTGTACGACATCAACCCGGTCGGGCTGATGGCAATGCTGGTGGCGGCGGCGCTGGCCATGCTGGCCTACTCCGGCGCGCTGGGGCATTGGGCCAAGGCCTTTTCGCCCTTCATCGCGCTGGTCACGGCCATGGCCGTGTCGCCTCTGCTGGCCTGGCGCACGCGCGGGCGCTACTACCTGGCGCGCAACGACATCGAGCGCTGGGCGCCGGGCCAGAGCGTGAAATGCTCGGTGTGCGACAACAGCTTCGAGTCGGAAGACATGGCGCATTGCCCGGCCTACAGCGCGCCGATCTGCTCGCTGTGCTGCACGCTGGAATCGCGCTGCCACGATCGCTGCAAGACCGACTCGCGCGCGGCCGAGCAGATGAGCGGATGGCTGCAGGCATTGTTGCCGCCGGCCTTGTCGGCGCGGCTCAACTTCCGCGTGGCGCACTACCTGATGGTGGCGGCCTCGCTGATCGCGCTGCTGGCCACCGTGGTGGGCGTGGTCTATGCGCAGGAGGCCATCGCCGGCACCAGCGACTCGACCATGGCCACGGCCTTCCTGAAGGTTTTCGCGCTGCTGTCGGTGGTGGCCGCCGTGGCGGCGTGGTGGGTGGTGCTGGGCAGCGAAAGCCGGCAGATGGCACAGGAAGAATCGAACCGCCACAACAACCTGCTGGCGCTGGAGATCGAGGCGCACCGCCGCACCGACGCCGCGCTGCAGACCGCCAAGGAAGCCGCCGAGGCCGCCAACCAGGCCAAGACGCGTTATGTGGCCGGCATGACGCACGAGCTGCGCACGCCGCTCAACAGCATCCTGGGCTATTCGCAGATCCTGCTCAAGGGCGATGCGGTGACGCCGCCGCGCGAGGCGGTGCAGACCATCCACCGCAGCGGCGAGCACATGCTGGGCCTGATCGACGGCCTGCTCGACCTCGCGCGCATCGAGGCCGGCCGGCTTCAGCTGGAGCCCGCGCCGCTCGCGCTGCCGGCCTTTCTGGACCAGCTGGTGCACATGGTGCGGCCACAGGCCGAGAACAAGGGCCTGGCCTTCGTCTACACGCATGCGGGGCGGCTGCCGCCGTGGGTGCATGCCGACGCCAAGTGGCTGCGCCAGATCCTCATCAACCTGCTGACGAACGCGGTGCGCTTCACCGACAGCGGCACCGTCACGCTGCATGTGGATGCACGGCGCGAGGTGCTGCGCTTCGACGTGGTCGACACCGGCATCGGCGTGGCGCCGCAAGACCACCAGCGCATCTTCCTGCCCTTCGAGCGCGGCGCCGCGGGCCGTCGCCGGGGCGAGCCGGGCACGGGGCTGGGCCTCACGATCACGGGGCTGCTCACATCGCTGATGGGTGGCGAGCTCAAGCTGGCCTCGACCTCGTCGCAAGGCAGCACCTTCAGCGTGCGCGTGTATCTGCGCGAAGTGGCCGATCCCGGCCCGCAGGCCCGCGCGGGCGCGCCGCGCCAGCCGGTGTCGGGCTACCTGGGCGCGCGCCGCACGCTGCTGGTGGTCGACGACCAGCCGGTGCAGCGCCAGATGCTGGCCGGCATGCTCGCTCCGCTGGGCTTCGAGGTGCGCGAGGCCGCGAGCGGCACCGAGTGCCTGGACAGCCTGCGCGAGGAATTGCCCTCGGCCATCCTGCTCGACCTGACGATGGACGACATGGACGGCTGGCAGACCGCCACGTCGGTGCGCGCCTCGGGCTTCGGGGACATACCGATCATCATCGTCTCGGCCAACATGTTCGAGAACCAGGCCGAGCGGCTGCGCGCGGCGGGCTGCCAGGCCTTCGTGGGCAAGCCGGTGATCGAGTCGGAGCTGATCGCGACGCTGGAGCGCCATCTCGGGCTGGAGTGGCTGTCGCCCGGCGACACGCCGCCGCGCGGCGACGACGAAGCCGCGCCGCTGCGCCCGCGCCGGCTCGAGCTGTCGGAAGACGACCGCGCCGAACTCATGCGGCTGGTGCAGATGGGCCATGTGCGCGGCCTGCACACCGCGCTCGACCGGCTGGCCGCCGCATCGCCTTCGGCGGCGGCCACCTGCACCTGGCTGCGCGGCATGGTCGCGCGCTTCGAACTCGACAACCTCCGCAACGCACTGGCAGAAGATGCAGACACCCTCGCCCCTTGA
PROTEIN sequence
Length: 1131
MQSVSGQKIFRIRRDYNAWVANETLEDYALRYTPRSFRKWSEFRVANAAFGATSFLALEAIGGAIALSYGFSNALWAILVVGLITFLTGLPISYYAARHGVDMDLLTRGAGFGYLGSTLTSLIYASFTFIFFALEAAILALALQMYLDWPLWLLYLVSSIVIIPLVARGITLISGLQLWTQPIWIVLFVCPFIAVLVKKPELYADFTGLVGRTSDSSGFDPLMFGAAATVAFSLVVQIGEQVDYLRFLPEKTAANRVRWWTAVLVAGPGWIVPGMLKMMGGAFLAFLALQHEIPAVHAIEPTQMYLTGFSYVLRDPAWVLGVTVLFVVVSQMKINLTNAYAGSLAWSNFFARLTHSHPGRVVWLVFNVVIAILLMALGVFAALEHVLGFYSNIAIAWVGALVADLVINKPLGWSPKTIEFKRAHLYDINPVGLMAMLVAAALAMLAYSGALGHWAKAFSPFIALVTAMAVSPLLAWRTRGRYYLARNDIERWAPGQSVKCSVCDNSFESEDMAHCPAYSAPICSLCCTLESRCHDRCKTDSRAAEQMSGWLQALLPPALSARLNFRVAHYLMVAASLIALLATVVGVVYAQEAIAGTSDSTMATAFLKVFALLSVVAAVAAWWVVLGSESRQMAQEESNRHNNLLALEIEAHRRTDAALQTAKEAAEAANQAKTRYVAGMTHELRTPLNSILGYSQILLKGDAVTPPREAVQTIHRSGEHMLGLIDGLLDLARIEAGRLQLEPAPLALPAFLDQLVHMVRPQAENKGLAFVYTHAGRLPPWVHADAKWLRQILINLLTNAVRFTDSGTVTLHVDARREVLRFDVVDTGIGVAPQDHQRIFLPFERGAAGRRRGEPGTGLGLTITGLLTSLMGGELKLASTSSQGSTFSVRVYLREVADPGPQARAGAPRQPVSGYLGARRTLLVVDDQPVQRQMLAGMLAPLGFEVREAASGTECLDSLREELPSAILLDLTMDDMDGWQTATSVRASGFGDIPIIIVSANMFENQAERLRAAGCQAFVGKPVIESELIATLERHLGLEWLSPGDTPPRGDDEAAPLRPRRLELSEDDRAELMRLVQMGHVRGLHTALDRLAAASPSAAATCTWLRGMVARFELDNLRNALAEDADTLAP*