ggKbase home page

SCNpilot_expt_500_p_scaffold_192_27

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(23159..23635)

Top 3 Functional Annotations

Value Algorithm Source
Transcription elongation factor GreA n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6VB44_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 98.7
  • Coverage: 158.0
  • Bit_score: 303
  • Evalue 1.10e-79
  • rbh
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.7
  • Coverage: 158.0
  • Bit_score: 304
  • Evalue 1.20e-79
transcription elongation factor grea; K03624 transcription elongation factor GreA similarity KEGG
DB: KEGG
  • Identity: 98.7
  • Coverage: 158.0
  • Bit_score: 303
  • Evalue 3.50e-80
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 477
ATGGCAACCATTCCGATCACCAAGCGCGGCGCTGAAAAACTGCGTGCCGAATTGCATCAGCTCAAGACGGTGGACCGTCCCTGGGTCATCAACGCCATTTCCGAAGCACGTGCCCAGGGCGACCTGAGCGAGAACGCCGAATACGAAGTCGCCAAGGACCGCCAGGGCTTCATCGAAGGCCGCATCCAGGAAGTCGAGGGCAAGCTGTCCGCCGCGCAGGTCATCGACCCGAGCGAGCTCGATGCAGGCGGCAAGGTGGTGTTCGGCTCTACCGTCGAACTCGAGGAAGAAGAGTCCGGCGAAGCCGTGAAGTACCAGATCGTAGGCGAGGACGAAGCCGACCTGAAGCTCGGCCTCATCAACATCTCCAGCCCGATCGCGCGCGCGCTCATCGGCAAGGAAGAGGGCGACACCGCCGAAGTGCAGGCGCCCGGCGGCCTGAAGCGCTACGAGATCGTGGCCGTTCGCTACCTCTGA
PROTEIN sequence
Length: 159
MATIPITKRGAEKLRAELHQLKTVDRPWVINAISEARAQGDLSENAEYEVAKDRQGFIEGRIQEVEGKLSAAQVIDPSELDAGGKVVFGSTVELEEEESGEAVKYQIVGEDEADLKLGLINISSPIARALIGKEEGDTAEVQAPGGLKRYEIVAVRYL*