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SCNpilot_expt_500_p_scaffold_204_4

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(3594..4379)

Top 3 Functional Annotations

Value Algorithm Source
Spermidine synthase n=1 Tax=Variovorax sp. CF313 RepID=J3CES6_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 93.1
  • Coverage: 261.0
  • Bit_score: 497
  • Evalue 1.10e-137
  • rbh
Spermidine synthase {ECO:0000313|EMBL:EJL70184.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.1
  • Coverage: 261.0
  • Bit_score: 497
  • Evalue 1.60e-137
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 93.5
  • Coverage: 260.0
  • Bit_score: 495
  • Evalue 7.90e-138
  • rbh

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 786
ATGGCATCGAGCAAAACCCCCGTCTCTCTTCCCGAAGTCAATTTCTCCGACTGGGGCGATATCCGTTATCTGCACCTGGGCACCGAATGGGTCCAGGGCTCCATGAAGATCGACGCGCCCTTCGAGATCGAGCTCGAGTACGTGCAGCGCATGATGGCCTGGCTGCTGTTCGCCGACGGCAAGACCGTGGCCAGCCGCCACGCGATGCAACTGGGCCTCGGCGCGGCCACGCTCACCAAGTTCAGCCGCAAGATCCTGCGCATGCGCACCACCGCGATCGAGCTCAACCCGCAGGTGGTGTCGGCCTGCCGCGGCTGGTTCAAGCTGCCGGCCGACGACCCGAAGCTGCGCGTGGTGATCGCCGATGCCGCGGCCGAAATCCGCAAGCCCGAATGGCACGGCACGGTCGACGCGCTGCAGGTCGACCTGTACGACCACGAGGCCGCGGCGCCCGTGCTCGACAGCGAAGACTTCTATGCCGACTGCCGCGCGCTGCTCACCGATGACGGTTGCATGACCGTCAACCTTTTCGGCCGCTCGTCGAGCTACGAGCGCAGCCTCGAGAAGATCGCGAATGCCTTCGGCGAGGATGCCGTGTGGGCCTTCAAGCCGACGCGCGAAGGCAACACGGTGGTGCTTGCGCAGCGCACACCGAGCCGCCCGAAGCGCGAGGTGCTTGCCGAGCGCGCCCAAACGATCCAGACTCGATGGGGCTTGCCCGCGCCCAAATGGTTGCGGGTGTTCAAACCCCAGAACTCGACACTCACCCGAACCACCGGCTCATGA
PROTEIN sequence
Length: 262
MASSKTPVSLPEVNFSDWGDIRYLHLGTEWVQGSMKIDAPFEIELEYVQRMMAWLLFADGKTVASRHAMQLGLGAATLTKFSRKILRMRTTAIELNPQVVSACRGWFKLPADDPKLRVVIADAAAEIRKPEWHGTVDALQVDLYDHEAAAPVLDSEDFYADCRALLTDDGCMTVNLFGRSSSYERSLEKIANAFGEDAVWAFKPTREGNTVVLAQRTPSRPKREVLAERAQTIQTRWGLPAPKWLRVFKPQNSTLTRTTGS*