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SCNpilot_expt_500_p_scaffold_204_5

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(4379..4912)

Top 3 Functional Annotations

Value Algorithm Source
DNA glycosylase n=1 Tax=Variovorax paradoxus RepID=UPI00038163E5 similarity UNIREF
DB: UNIREF100
  • Identity: 88.8
  • Coverage: 179.0
  • Bit_score: 326
  • Evalue 2.30e-86
  • rbh
G:T/U mismatch-specific DNA glycosylase {ECO:0000313|EMBL:EJL70185.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.5
  • Coverage: 176.0
  • Bit_score: 319
  • Evalue 2.40e-84
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 86.4
  • Coverage: 176.0
  • Bit_score: 311
  • Evalue 2.50e-82
  • rbh

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGAAGCTTTCCGTCGCACCCGATGCCGCCGACAGCGCCGTGCTCACCGGCCTGCAGCCCATCGTTTCGCCAAAGACCGTCGTACTCATCCTCGGCAGCTTCCCCGGGGTCAAGTCGCTCGAGCGGCAGCAGTACTATGCACACCCTCAAAACCAGTTCTGGAAGATCCTGCAAGCCGTGTGGCCCGACATTCCCCTTCCCTCGGGCGCCGACAGCTACGGGTCGCGCTGCCGGTGGCTGCTCGATCGCGGCCTGGGCGTGTGGGACGTGTATGCCTCTTGCGAGCGCGAAGGCAGTCTCGACTCCGCCATCCGCGCGCCGGTGGCGAACGACATCGCCGGACTGCATCTGCCCAAGCTCGCGGCCATCGCCCATAACGGCGGCGAGAGCTTCAAGCATGCACGCCACACGCGCACGCTCGGCGTGCCGGTCTACCAGCTGCCTTCCACCAGTCCCGCCAACGCGTCGTGGAGCTTCGAGCGCAAGCTCGCTGCCTGGCGCGAGGTCCTGGCCGCCCACAATCTAGTCGTCTGA
PROTEIN sequence
Length: 178
MKLSVAPDAADSAVLTGLQPIVSPKTVVLILGSFPGVKSLERQQYYAHPQNQFWKILQAVWPDIPLPSGADSYGSRCRWLLDRGLGVWDVYASCEREGSLDSAIRAPVANDIAGLHLPKLAAIAHNGGESFKHARHTRTLGVPVYQLPSTSPANASWSFERKLAAWREVLAAHNLVV*