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SCNpilot_expt_500_p_scaffold_204_15

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(13022..13696)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J2SX25_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 94.4
  • Coverage: 213.0
  • Bit_score: 391
  • Evalue 5.70e-106
  • rbh
Transcriptional regulator {ECO:0000313|EMBL:EJL70192.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.4
  • Coverage: 213.0
  • Bit_score: 391
  • Evalue 8.10e-106
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 93.5
  • Coverage: 215.0
  • Bit_score: 390
  • Evalue 4.00e-106
  • rbh

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 675
ATGCCGCGTGGAAGATCCGCCACCTACGACGACCAGCGCGAGCTGATCCTCGCGCAGGCCGCGCAGCTGTTCGCACGCAGCGGCTACCCCGCCACCTCGATGAACCAGGTGGCAGAGGCCTGCGGCCTTTCCAAAGCCACGCTCTATCACTACTACAAGGACAAGAGCAGCCTGCTGATCAGCATCGCCGAGACGCACGTGTCCAAGCTGGCAGCGCTGGTGGCAGAGGAAGAGGCGTCGACGCACACAGACGAACAACGCCTGCGCCGCTTCATCTACCGCATCGTCGAGGAATACGCGGGCGCGCAGGACGCGCACCGGGTGCTGACCGACGACGTGCGCTTCCTGGAAGAGGCCGACCGCGAGCGCGTGCTCGACAAGGAGCGCGAGGTGGTCGCGGGCTTCGCGCGCGCCGTCTCCGCACTGCGCCCCGGCGCGCCGAGCGACGACCTGGCCAAGCCGCTGACCATGCTGCTGTTCGGCATGATCAACTGGATGTTCACCTGGATGAAGCCCGGCGGGTCGCTCGACCACGCGGCCATCGCGCCGATCGTGGCGGACCTGTTCCTGGGGGGCATCGGGGCGGTCAAGTCGCCGGACTACGGGGCCATAGAGGCCCGGGCCGCCGAGGCCTCGGCAGCCGTGGAAACCCAGCCTCAGGCCGCGACCGAATAG
PROTEIN sequence
Length: 225
MPRGRSATYDDQRELILAQAAQLFARSGYPATSMNQVAEACGLSKATLYHYYKDKSSLLISIAETHVSKLAALVAEEEASTHTDEQRLRRFIYRIVEEYAGAQDAHRVLTDDVRFLEEADRERVLDKEREVVAGFARAVSALRPGAPSDDLAKPLTMLLFGMINWMFTWMKPGGSLDHAAIAPIVADLFLGGIGAVKSPDYGAIEARAAEASAAVETQPQAATE*