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SCNpilot_expt_500_p_scaffold_222_21

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 23337..24005

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter, permease protein n=1 Tax=Variovorax paradoxus B4 RepID=T1X3Z2_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 97.3
  • Coverage: 222.0
  • Bit_score: 432
  • Evalue 2.20e-118
  • rbh
Variovorax paradoxus strain MEDvA23 contig_4, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ37008.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.2
  • Coverage: 222.0
  • Bit_score: 435
  • Evalue 4.80e-119
ABC transporter, permease protein similarity KEGG
DB: KEGG
  • Identity: 97.3
  • Coverage: 222.0
  • Bit_score: 432
  • Evalue 7.00e-119
  • rbh

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 669
ATGGATCTCGATTTCTCGCCCGTCTGGCAGGGCTGGCCCGACCTGCTGCGCGGCGCGCTGGTCACGGTGGAGATCACCGCCTGCGCGCTGGCCCTGGGCTGCGTGCTGGGCCTCCTGGTCGGCATCGGCCGGCTGAACCCGAAGCGGCGCTGGATCTACGGCGCGTGCACCGCCTACGTGGCGGCCATTCGCGGCACGCCGCTGCTGGTGCAGCTGTTCATTCTGTTCTTCGGCCTGCCGCACTTCGGCATCTTGCTGCCGGCCTTCCTGTGCGGCGTGCTCGGGCTCGGCGTGTATTCGGGCGCGTACGTGTCGGAGATCGTGCGTGGCGCGATCCAGTCGATCGACAAGGGCCAGACGATGGCGGCGCAATCGCTGGGCATGACGCCCGGCGTCGCCATGCGCCAGATCGTGCTGCCGCAGGCGGTGGTGCGCATGATTCCGCCGCTAGGCAACGAGTTCATCGCGCTGATCAAGAACTCGGCGCTGGTGTCTCTCCTGACCATCCACGACGTGATGCACGAAGGACAGAAGATCATCAGCGTGTCTTACCGGTCGCTGGAGGTGTACCTCGCGATTGCGGTGGTGTACTTCGTGCTCACGGGCACGATGACGCTGATCCTGAGGCACTTCGAGCAGAAGCTGCGGCAAGGCGGGTTGATGCGATGA
PROTEIN sequence
Length: 223
MDLDFSPVWQGWPDLLRGALVTVEITACALALGCVLGLLVGIGRLNPKRRWIYGACTAYVAAIRGTPLLVQLFILFFGLPHFGILLPAFLCGVLGLGVYSGAYVSEIVRGAIQSIDKGQTMAAQSLGMTPGVAMRQIVLPQAVVRMIPPLGNEFIALIKNSALVSLLTIHDVMHEGQKIISVSYRSLEVYLAIAVVYFVLTGTMTLILRHFEQKLRQGGLMR*