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SCNpilot_expt_500_p_scaffold_381_10

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 7506..7928

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Variovorax paradoxus RepID=UPI0003631B0B similarity UNIREF
DB: UNIREF100
  • Identity: 86.9
  • Coverage: 137.0
  • Bit_score: 236
  • Evalue 1.90e-59
transmembrane protein; K07112 similarity KEGG
DB: KEGG
  • Identity: 80.4
  • Coverage: 138.0
  • Bit_score: 222
  • Evalue 7.00e-56
Putative transporter component {ECO:0000313|EMBL:EWS61929.1}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.4
  • Coverage: 138.0
  • Bit_score: 222
  • Evalue 3.10e-55

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Taxonomy

Methylibium sp. T29-B → Methylibium → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 423
ATGATCGCCCTCGCCTCGCTGCTCGCCGGCCTCGTCTTCGGACTCGGCCTCATCGTCTCGGGCATGGCCAACCCGGCCAAGGTGCTCGGCTTCCTGGACCTCGCCGGCCACTGGGACCCATCCCTGGCTTTCGTCATGGCGGGCGCCATCGCCGTCGGATCGGTCGCGTTCCTGGCCGCAAGGCGGCGCAGCAAGTCCCTGCTGGGCGCGGCGATGCGCCTGCCATCGGCGCGCGGGATCGACCGGCGCCTGGTCGTCGGCAGCGTCGTTTTCGGAGTTGGCTGGGGCATCGCGGGCTTCTGTCCCGGCCCGGGCCTCGTCGCCCTGGGCATGGGCGAAGCCAAGGCCCTCGTCTTCGTGCTCGCGATGCTCGCGGGCATGGGAATCTTCGAACTCATCGAGCACCGCGGGCGACAGCCCTGA
PROTEIN sequence
Length: 141
MIALASLLAGLVFGLGLIVSGMANPAKVLGFLDLAGHWDPSLAFVMAGAIAVGSVAFLAARRRSKSLLGAAMRLPSARGIDRRLVVGSVVFGVGWGIAGFCPGPGLVALGMGEAKALVFVLAMLAGMGIFELIEHRGRQP*