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SCNpilot_expt_500_p_scaffold_110_30

Organism: SCNPILOT_CONT_300_BF_Bacteroidetes_43_15

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: comp(33838..34392)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=R7RV83_FLAPJ similarity UNIREF
DB: UNIREF100
  • Identity: 56.6
  • Coverage: 173.0
  • Bit_score: 192
  • Evalue 3.20e-46
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 53.6
  • Coverage: 183.0
  • Bit_score: 189
  • Evalue 8.60e-46
Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_31_7_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 56.2
  • Coverage: 178.0
  • Bit_score: 193
  • Evalue 2.00e-46

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Taxonomy

RIFCSPLOWO2_12_FULL_Flavobacteria_31_7_curated → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 555
TTGAACAACGAAGCAATTATAAAAGCATGTATCTCGGGAGATAGAAAAGCGCAGCATACTTTGTATCTGCAGCTTGCTCCTATGTTGCATAGCGTATGCAAGCGTTATTTGAAGGCGGAGATGGAAATTGAAGATGCATTGGCGGAAGCTTTTGTACTCATTTTTACTAAGATGAATACCCTGAAGGATGCGGAAGCTTTGTTCGGGTGGGCTAAAAGGGTAGCCGTAAACCAATGTTTACAGCAACTGCGTAAAAAAGTTAATTTCAATTTGTCGCTGGATGATATAAAGCACGAACCGGTATTTGAGCAATCGACCACCCAGCAGCTGGAGCATAAAGACCTGCTGAAACTGCTGGATTATCTGCCGGACGGGTGCCGGTCCATATTTAACCTGTTTGCTATAGAGGGCTATAGCCATAAAGAGATTGCGGTACTACTGCAGATCTCTGAAGGTACCTCTAAATCGCAGGTAAATGTGGCGCGGGTAAAATTGCAAAAGTTGGTGAAACAGCACTATGATCTAAAAAATGAAGAAAATGGAATCGCAAAATAA
PROTEIN sequence
Length: 185
LNNEAIIKACISGDRKAQHTLYLQLAPMLHSVCKRYLKAEMEIEDALAEAFVLIFTKMNTLKDAEALFGWAKRVAVNQCLQQLRKKVNFNLSLDDIKHEPVFEQSTTQQLEHKDLLKLLDYLPDGCRSIFNLFAIEGYSHKEIAVLLQISEGTSKSQVNVARVKLQKLVKQHYDLKNEENGIAK*