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SCNpilot_expt_500_p_scaffold_7107_3

Organism: SCNPILOT_EXPT_500_P_Alphaproteobacteria_36_9_partial

near complete RP 51 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 1494..2267

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.7
  • Coverage: 257.0
  • Bit_score: 465
  • Evalue 5.00e-128
50S ribosomal protein L3 id=3298609 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=Pseudovibrio taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + similarity UNIREF
DB: UNIREF100
  • Identity: 60.9
  • Coverage: 256.0
  • Bit_score: 319
  • Evalue 4.20e-84
rplC; 50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 similarity KEGG
DB: KEGG
  • Identity: 63.2
  • Coverage: 231.0
  • Bit_score: 310
  • Evalue 6.10e-82

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 774
ATGCGCACAGGATTAATTGCAGAAAAGTTAGGAATGACACGCGTTCTCAGCCCTCAGGGTGAGCACATTCCGGTGACACTATTAAAGGTTGATGCATGTCAGGTCACTGACGTAAAAACAGAAGAGAAGCACGGTTATAACGCGGTTCAAATTGGTGTAGGCGTTATTAAAGCGAAAAAAGTCTCAAAGCCTGTGCGTGATGGTTTTGCGAAGAAAAAAATTGAACCTAAAAGAGTTCTAAAAGAGTTTCGTGTCGCTCAAGATGCTTTACTTGAACTTGGTGCGCAGATTTCTGTTGATCATTTTGTTCCTGGTCAGTATGTTGACGTCACTGGAGCATCAGTGGGTAAGGGTTTCGCTGGTGTTATGAAGCGTCACAATTTTGGTGGACTAAGGGCCTCTCATGGTGTGTCTATTACACATAGAAGCCATGGTTCAACTGGGCAGCGTCAAGATCCTGGGCGTGTTTTCAAGGGAAAGAAAATGGCAGGCCATCTTGGATGTGAACAGATTACAACACAAAATTTGCAAATTTTTTCAACTGATGTTGATAAAGGGCTTATTTTTGTACGTGGAAATGTTCCTGGTGGTGAAGGTTCTTATGTGGTGATCAAGGATGCAATAAAGAAGGTTCGCCCAGAAAGTGCGCCATATCCAGCATCTCTTCTAGTGAAGAAAGAAGCAAGTGCGAAAGCAGAGAAAGCTTCAACTTCAAAAGAAACGGAAGAAGTAAAATCTGTTGAGGTGGAAACGCCAACAGAAACAACAGAATAA
PROTEIN sequence
Length: 258
MRTGLIAEKLGMTRVLSPQGEHIPVTLLKVDACQVTDVKTEEKHGYNAVQIGVGVIKAKKVSKPVRDGFAKKKIEPKRVLKEFRVAQDALLELGAQISVDHFVPGQYVDVTGASVGKGFAGVMKRHNFGGLRASHGVSITHRSHGSTGQRQDPGRVFKGKKMAGHLGCEQITTQNLQIFSTDVDKGLIFVRGNVPGGEGSYVVIKDAIKKVRPESAPYPASLLVKKEASAKAEKASTSKETEEVKSVEVETPTETTE*