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SCNpilot_expt_500_p_scaffold_7107_10

Organism: SCNPILOT_EXPT_500_P_Alphaproteobacteria_36_9_partial

near complete RP 51 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 5430..5849

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L16 n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=RL16_RHOCS similarity UNIREF
DB: UNIREF100
  • Identity: 84.2
  • Coverage: 139.0
  • Bit_score: 248
  • Evalue 2.90e-63
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.6
  • Coverage: 139.0
  • Bit_score: 278
  • Evalue 6.20e-72
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 similarity KEGG
DB: KEGG
  • Identity: 84.2
  • Coverage: 139.0
  • Bit_score: 248
  • Evalue 9.00e-64

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 420
ATGTTAGCTCCTAAAAGAACAAAATATCGTAAAGCGCATAAGGGCCGTATCCATGGTGTTGCAAAAGGTGGAACTGCACTTAATTTTGGCGCTTATGGTTTAAAGGCACTTGAGCCTGCTCGTGTGACTGCACGTCAGATCGAAGCAGCGCGTCGTGCAATTACGCGTCATATCCGTCGTGCAGGCCGTGTATGGATTAGAATTTTTCCGGATGTTCCTGTGTCAACAAAACCAGCCGAAGTGCGTATGGGAAGTGGTAAGGGGAATCCTGAGTACTGGGCTTGCCGTGTTGCGCCTGGAAGAATTATGTTTGAGCTTGACGGCATCCCCGTAGATCTGGCAAAAAGAGCATTCGAGTTAGCGGCAGCGAAGCTTCCTATCAAAACCCGCTTTGTAGCACGTATTGGCGCTGAAGGATAA
PROTEIN sequence
Length: 140
MLAPKRTKYRKAHKGRIHGVAKGGTALNFGAYGLKALEPARVTARQIEAARRAITRHIRRAGRVWIRIFPDVPVSTKPAEVRMGSGKGNPEYWACRVAPGRIMFELDGIPVDLAKRAFELAAAKLPIKTRFVARIGAEG*