ggKbase home page

SCNpilot_expt_500_p_scaffold_318_10

Organism: SCNPILOT_CONT_500_P_Rotifera_33_75

partial RP 42 / 55 MC: 35 BSCG 20 / 51 MC: 11 ASCG 30 / 38 MC: 20
Location: comp(8151..8762)

Top 3 Functional Annotations

Value Algorithm Source
DNA topoisomerase 2-like; K03164 DNA topoisomerase II [EC:5.99.1.3] similarity KEGG
DB: KEGG
  • Identity: 52.1
  • Coverage: 190.0
  • Bit_score: 200
  • Evalue 4.10e-49
DNA topoisomerase 2 {ECO:0000256|RuleBase:RU000381}; EC=5.99.1.3 {ECO:0000256|RuleBase:RU000381};; TaxID=7994 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Characidae; Characidae incertae sedis; Astyanax clade; Astyanax.;" source="Astyanax mexicanus (Blind cave fish) (Astyanax fasciatus mexicanus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.5
  • Coverage: 204.0
  • Bit_score: 198
  • Evalue 9.10e-48
PREDICTED: DNA topoisomerase 2-beta-like n=1 Tax=Haplochromis burtoni RepID=UPI0003BCA004 similarity UNIREF
DB: UNIREF100
  • Identity: 52.9
  • Coverage: 191.0
  • Bit_score: 194
  • Evalue 9.40e-47

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Astyanax mexicanus → Astyanax → Characiformes → Neopterygii → Chordata → Metazoa

Sequences

DNA sequence
Length: 612
ATGAATAAATCCATTAGTGACGCACCAAATAAAGAAGAAGAAACCTATCAACTTCTCGAACAACTCGATCACATTCTCAAACGTCCAGAAACGTATATCGGTTCGAACAAACCATGTCACGAAGAAATGTGGATTCTCGACGAACAAAATGAAGACGGACCAAAAATTGTCAAAAAACAAATCACTTATGTGCCCGGTCTTTACAAAATTTTTGATGAAATTCTCGTCAATGCTGCCGATAACAAACAACGTGACTCAACAATGACATCGATCGAAGTCGATATTAATCAAGAAAAGGGTGAAGTTAAAATCTGCAACGATGGCCGTGGTATTCCAGTTCGTAAATGGGCTCAAGATGAATCGATTTATATTCCCACGTTGATCTTCGGCAAACTTCTCACATCCGACAATTTCAATGACGATCAAAAACGAATCACCGGTAACCGAATAAACCGCTCTCTCTCTCTCCTAGAATCGATTCAGTTCAATTCGCTTTTATTTTCAGGTGGTCGAAATGGTTACGGTGCTAAAGTAACGAATATTTTCAGTACAAAATTTACCGTTGAAACATGTTCAAAAGAATACAAAAAAGTCTTTCGACAAGTAAATTGA
PROTEIN sequence
Length: 204
MNKSISDAPNKEEETYQLLEQLDHILKRPETYIGSNKPCHEEMWILDEQNEDGPKIVKKQITYVPGLYKIFDEILVNAADNKQRDSTMTSIEVDINQEKGEVKICNDGRGIPVRKWAQDESIYIPTLIFGKLLTSDNFNDDQKRITGNRINRSLSLLESIQFNSLLFSGGRNGYGAKVTNIFSTKFTVETCSKEYKKVFRQVN*