ggKbase home page

SCNpilot_expt_500_p_scaffold_220_5

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 50 / 55 BSCG 50 / 51 MC: 1 ASCG 12 / 38
Location: comp(9363..10265)

Top 3 Functional Annotations

Value Algorithm Source
Filamentous hemagglutinin family outer membrane protein n=1 Tax=Calothrix sp. PCC 7507 RepID=K9PNG9_9CYAN similarity UNIREF
DB: UNIREF100
  • Identity: 44.2
  • Coverage: 181.0
  • Bit_score: 121
  • Evalue 1.50e-24
filamentous hemagglutinin family outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 44.2
  • Coverage: 181.0
  • Bit_score: 121
  • Evalue 4.70e-25
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 45.2
  • Coverage: 197.0
  • Bit_score: 130
  • Evalue 4.50e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Acidobacteria_65_29 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 903
ATGACACAAAATCCGACCGCAGTATCCCAACCTGAGATTAAGGGAACCAGTAAACGTCCCTCTCATGATTTTTCACCCCTATCGGTCTTGCAGTTCGTGCCCGCAGCTTTGACGCCTTCCGCCACCGTTTCCGTTTTGGATAGCGCGGCCCAGGCAACCAGAATGGGGAAAACTCTTTCGGTAAAACGGTATATATCAACGGTTGGCCGCGCCAGCCTGTGCGGCTTTTGCCTGCTGTCTCTTCTCTTGATGGGTAGACCATCTCATGCAGCAACGTTTACGGAAATTTCGGATGCAGGAAGCCTTCCAGCTACTGCCCAGATAACGGCTGGCTCCGGATTTCTCACGGAGATCGACGGAAAATTGAGCCCCGCTGACGGGGACGGTCAGGATATGTACCTGATACATATCGATGGCGGCGGAACGTTCTCAGCCGCTACCGTGGGCGGGGCAAGTTTCGATACCGAACTATTTCTCTTCGATGCAAATGGAAAGGGCGTGTACGCAAATGATGATGCGTCTGGCGACTTTGCTCCATCGATGCTTCGTGCCTACACTTCACTCACGCCCATTACCCCCGGCGATTATTATCTGGCAATCACGCAATGCTGTTCCGCGCCGGTTAGCAGCGATGGTCAAATCTTTACTATCGCAGGGCCCAACCATCGTGCCTTGAGTGGCCCGACTGGTGCCGGGGGCGCTTTACCGGTCACGGGATACGCGGGCGGGTTTGTTCAGACGCCGGGGGGCGGCGCTTATCAGATATTTCTTACCGGCGCCTACGCGTCAATCGTCACAGGTGCTCAAGTCTCGGCCGTCCCGGAACCCAACGTATTCGCGTTAATGCTCGCGGGACTGGGCATGATGGCCTTATTGGCGCGCCCTTGCCGTAAAACCGCTTAA
PROTEIN sequence
Length: 301
MTQNPTAVSQPEIKGTSKRPSHDFSPLSVLQFVPAALTPSATVSVLDSAAQATRMGKTLSVKRYISTVGRASLCGFCLLSLLLMGRPSHAATFTEISDAGSLPATAQITAGSGFLTEIDGKLSPADGDGQDMYLIHIDGGGTFSAATVGGASFDTELFLFDANGKGVYANDDASGDFAPSMLRAYTSLTPITPGDYYLAITQCCSAPVSSDGQIFTIAGPNHRALSGPTGAGGALPVTGYAGGFVQTPGGGAYQIFLTGAYASIVTGAQVSAVPEPNVFALMLAGLGMMALLARPCRKTA*