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SCNpilot_expt_500_p_scaffold_220_20

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 50 / 55 BSCG 50 / 51 MC: 1 ASCG 12 / 38
Location: 22746..24590

Top 3 Functional Annotations

Value Algorithm Source
Protein translocase subunit SecD n=1 Tax=Nitrosospira sp. APG3 RepID=M5DL92_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 87.8
  • Coverage: 613.0
  • Bit_score: 1054
  • Evalue 0.0
  • rbh
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.8
  • Coverage: 613.0
  • Bit_score: 1054
  • Evalue 0.0
secD; preprotein translocase subunit SecD; K03072 preprotein translocase subunit SecD similarity KEGG
DB: KEGG
  • Identity: 85.2
  • Coverage: 614.0
  • Bit_score: 1036
  • Evalue 0.0
  • rbh

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Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1845
ATGAACCGCTACCCCGCCTGGAAATACCTCATCATCGCGGTTGCGATACTGCTGGGGCTGATCTATACCCTGCCGAACTTTTACGGCGAGTCGCCCGCGGTGCAGGTTTCGCCGCTGCGTACCGCCGCGAAGGCGGATACCGCGCTTCTTCAGCGGGTCGAAGACACGCTGAAGAAGGCGAACATCGTTCCTGACGGCGTATTTCTCGATGCCTCGGGAGTCAAGGCACGCTTCTCCGATACCGATATGCAGATCAGGGCAAGGGATACGCTCCAGTCCGTGCTTGGCAATGGGTACATGGTGGCGCTGAACCTACTTTCCAATTCTCCCCGGTGGCTCACGAGCATCGGGGCGCTGCCGATGTACCTCGGGCTCGATTTACGCGGGGGTGTGCATTTCATGTTGCAGGTGGATATGAAGGGAGCGCTCTCCAAGGCACTGGACCGCTTCAGCACCGACATACGCGGCAGCTTGCGCGAGAAGAAAATTCCCTATGCAGGACTCGACAAGCAAGGCGCCCAGGTCGTCGTCAAATTCCGGGATGCCGCTTCACGGAGCCGGGCGGAAGCCGAAATCAGCAAGGTTTACGAGGATTTGAGCTTGCGGGAGCAAAACGTGGGGGATGAGTTCCATTTGACGGCCGCTCTCAAGCCTGAAGCGCAAAAGCGTATTCAGGACTCGGCGGTGCAGCAGAATATCACGACATTGCGCAACCGCGTCAATGAACTCGGCGTGGCCGAACCCATCATCCAGCAGGCCGGCGCCGATCGCGTGGTGGTGCAGTTGCCCGGGGTTCAGGATACGGCAAAAGCCAAGGATATACTCGGACGCACAGCCACTCTGGAGGTGCGCATGGTGGACGAGGAGCGCGACGTGGAAGCAGCCTTGCGCGGACAGGTTCCCTTCGGTTCCGAGCTGTACACGGAGCGCGGCGGCGGTCCCATACTGGTGAAGAAACAGGTGGTGCTCACCGGCGACCGCATCAATGATGCCCAGGCCGGTTTCGACAACAACAACCAGCCCGCGGTGCATCTCAACCTGGACAACAGCGGCGCGCGCATATTCCGTCAGCTGACCCACGATAATGTCGGCAAGCGCATGGCGATACTGCTGATCGAGAAGAACCAGGCAGAGGTTGTCACGGCGCCGGTAATACGCGAAGAAATCGGCGGTGGAAGAGTGCAGATCAGCGGGCGCATGACCACCGAGGAGGCGCGGGACGTAGCATTGCTATTGCGTGCCGGGGCACTGGCGGCGTCGATGGATATCATCGAGGAGCGCACTGTCGGCCCCAGCCTCGGCGCCGACAACATCGCGCGCGGGTTCAACTCCACGTTGTTCGGTTTTATTGCCGTCGGCATTTTCATGACGATTTATTATCTGATGTTCGGCTTCATCTCCGTCGTCGCGCTGGGCGTGAACCTGTTGCTGCTGATAGGCCTGCTTTCGATCCTGCAAGCCACGCTGACGTTGCCCGGCATGGCGGCAATCGCGCTGACCATCGGCATGGCGATCGATGCAAACGTGCTGATCAACGAGAGAATACGTGACGAATTGCGCAACGGCCTGCCGCCTCAGGCGGCGATAAGCGCGGGATATGAGCGTGCATTCGGCACCATCGTCGATTCCAATATCACCACGCTGATCGCGGGCATAGCGTTATTCGCTTTTGGGACGGGTCCCGTGAAGGGATTTGCCGTAGTGCTTTGCCTGGGTATTCTGACGTCCATATTCAGCGCGGTCATGGTCTCGCGCGGCATGGTGAACCTGATGTACGGCAGCCGCCGCAAGCTCGAGCGGGTCCCCATCGGGCAAATCTGGAAACCCGTGAGCAGCAAGCGTTGA
PROTEIN sequence
Length: 615
MNRYPAWKYLIIAVAILLGLIYTLPNFYGESPAVQVSPLRTAAKADTALLQRVEDTLKKANIVPDGVFLDASGVKARFSDTDMQIRARDTLQSVLGNGYMVALNLLSNSPRWLTSIGALPMYLGLDLRGGVHFMLQVDMKGALSKALDRFSTDIRGSLREKKIPYAGLDKQGAQVVVKFRDAASRSRAEAEISKVYEDLSLREQNVGDEFHLTAALKPEAQKRIQDSAVQQNITTLRNRVNELGVAEPIIQQAGADRVVVQLPGVQDTAKAKDILGRTATLEVRMVDEERDVEAALRGQVPFGSELYTERGGGPILVKKQVVLTGDRINDAQAGFDNNNQPAVHLNLDNSGARIFRQLTHDNVGKRMAILLIEKNQAEVVTAPVIREEIGGGRVQISGRMTTEEARDVALLLRAGALAASMDIIEERTVGPSLGADNIARGFNSTLFGFIAVGIFMTIYYLMFGFISVVALGVNLLLLIGLLSILQATLTLPGMAAIALTIGMAIDANVLINERIRDELRNGLPPQAAISAGYERAFGTIVDSNITTLIAGIALFAFGTGPVKGFAVVLCLGILTSIFSAVMVSRGMVNLMYGSRRKLERVPIGQIWKPVSSKR*