ggKbase home page

SCNpilot_expt_500_p_scaffold_3931_1

Organism: SCNPILOT_CONT_300_BF_Flavobacteriales_36_9

partial RP 33 / 55 MC: 7 BSCG 34 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 3..281

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: DNA mismatch repair protein MutS-like n=1 Tax=Solanum lycopersicum RepID=UPI0002BCA348 similarity UNIREF
DB: UNIREF100
  • Identity: 90.1
  • Coverage: 91.0
  • Bit_score: 160
  • Evalue 8.90e-37
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.6
  • Coverage: 92.0
  • Bit_score: 172
  • Evalue 3.20e-40
DNA mismatch repair protein MutS-like similarity KEGG
DB: KEGG
  • Identity: 90.1
  • Coverage: 91.0
  • Bit_score: 160
  • Evalue 2.80e-37

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Epilithonimonas lactis → Epilithonimonas → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 279
TTTGGTATTCACGTTGCGAAGTTAGCAGGAATGCCTTCTAAAGTTGTGAATCGTGCGAATGAGATTCTTAAAACTTTGGAATCCAGCAGAGCAACGCAAGATTCCGGAGAGAAAATAAAACGTGTAACGGAAGAAAATCTTCAGCTTTCATTTTTCCAATTAGACGATCCTGTTCTAGAAAATATCCGTGAAGAATTGACGAAAATTGACATCAATACTTTGACACCAATTGAAGCTCTGATGAAACTGAATGCTATTAAGAAGATGATTGGAAAGTAA
PROTEIN sequence
Length: 93
FGIHVAKLAGMPSKVVNRANEILKTLESSRATQDSGEKIKRVTEENLQLSFFQLDDPVLENIREELTKIDINTLTPIEALMKLNAIKKMIGK*