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SCNpilot_expt_500_p_scaffold_6100_5

Organism: SCNPILOT_EXPT_1000_BF_Afipia_63_13

partial RP 36 / 55 MC: 1 BSCG 36 / 51 MC: 4 ASCG 10 / 38
Location: 3644..4021

Top 3 Functional Annotations

Value Algorithm Source
Histone-like nucleoid-structuring protein H-NS n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QIY6_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 74.4
  • Coverage: 125.0
  • Bit_score: 180
  • Evalue 1.50e-42
histone-like nucleoid-structuring protein H-NS; K03746 DNA-binding protein H-NS similarity KEGG
DB: KEGG
  • Identity: 74.4
  • Coverage: 125.0
  • Bit_score: 180
  • Evalue 4.60e-43
Histone-like nucleoid-structuring protein H-NS {ECO:0000313|EMBL:ABE63811.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.4
  • Coverage: 125.0
  • Bit_score: 180
  • Evalue 2.10e-42

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Taxonomy

Nitrobacter hamburgensis → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 378
ATGCGAAAAGATAAAGATACAGATCTTGTTTCGATGCCATTTGACGAGCTCTGGCGCCTCCACGAGGACGTCACGAAGGTGCTGGCGGAAAGGATCGTCGCCGAAAAGCGCCAGTTGGAAAAACGATTGGCGCAGATCAACCGCAGCGCCCTGACGAATGGCGGCGGCGCTTCCAAGCGGTCTTCCGGCGTTGCCGGGGACGACCGGCCTCCGCGGCGGCACTATCCGAGAGTTCTACCCAAATACCGCAATCCGTCATCCCCCTCGCAAACCTGGTCCGGGCGTGGAAAAACGCCTCACTGGCTCGCCAACGCCCTCAAGAAAGGCCGCAAGATCGACGATTTCAGGATCGTCCACGCCGACAAGACCCGCGAGTAG
PROTEIN sequence
Length: 126
MRKDKDTDLVSMPFDELWRLHEDVTKVLAERIVAEKRQLEKRLAQINRSALTNGGGASKRSSGVAGDDRPPRRHYPRVLPKYRNPSSPSQTWSGRGKTPHWLANALKKGRKIDDFRIVHADKTRE*