ggKbase home page

SCNpilot_expt_500_p_scaffold_3244_6

Organism: SCNPILOT_EXPT_1000_BF_Burkholderiales_68_66

partial RP 29 / 55 MC: 3 BSCG 30 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: 4945..6126

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PI39_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 52.4
  • Coverage: 372.0
  • Bit_score: 394
  • Evalue 1.20e-106
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS42292.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.4
  • Coverage: 372.0
  • Bit_score: 394
  • Evalue 1.70e-106
Extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 35.0
  • Coverage: 377.0
  • Bit_score: 267
  • Evalue 6.90e-69

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1182
ATGTTTCTCAAAGCAGTCAACAAGCGGCCGTTTCGCAGGGTGTCGATGATCGCGAAGCTATGCGCGCCTGTCGCGATGATGCTGGCGGCCACGGCCTCGCAGGCGCAGGAGACGATCAGGATCGGCGGAATCTTCGCGCTGTCGGGCCCGGCGAGCTTCCTCGGGGTTCCCGAGGAGCGCGGCTTCCGGATGAAGATCGACGAGATCAACAAGGCCGGCGGCCTCAACGGCAGGAAGATCGAGGCGGTCGTCTACGACACCGAAGGCAATACGACCAAGGCCGCGCAGCAGTTCCGTCGACTCGCCGAATCCGACAACGTCATCGCCGTCATCGGGCCTTCGAGCTCCGGGGAAAGCCTGACCGTCGGTCCGATCGCCAACGAGCTGAAGGTGCCGACCGTCACGCACGCCGGCACCGAGAAGATGACGGTTCCGGTGACGCCGTGGGTATTCAACACGCCCCCCACCGACCGTGTCGTCGCGGCGCACCTGCTCGGCGTCTTCAAGAAACGCGGCATCACGAAGATCGGCCTGATGACCGCTGCCGACGGATTCGGGCAATCGGGCGCGAACGTCGTCAAGGAGCTCGCACCCCAGTACGGCGTGCAGGTTGCCCGCCACGAGGAGTTCAACCGCCAGGATGCCGACATCACCGCGCAGGTGCTGCGCGTGAAGGACTCCGACGCGCAGGCGATGCTGATCTGGAGCGCATTCCCGGCGCCGACGATCATCCTCAAGAACGCGGCGGCAGTCGGCTACAAGAAGCCGATCTACAACAGCTTCGCGGCCGCCAGCAAGGACCTGATCGTGCAAGGCGGCGCCAACGCCGAGGGCACGTACGTCTCGTCGATGCGCCTGCTCGCGCCCGAGACCCTCTCGGCCGACGACCCGATGCGCCAGATCGTCCAGAAGATCTACGCCGATTACAAGGAGCGCTACAAGGAGGCGCCTGCGACCTTCACCGCGCACAGCTACGACGCGTTGCTGATCATCGAGGCGGCCTCGAAGAAGATCCAGGGCCCGATCACCCGCCAGTCGCTGCGCGATGCGATGGAGACCGTCTCGGTAGCCGGCGGCAACGGCCTCTATCGGCTCTCCCCCAAGTCGCACGGACCGGACCCCGAATCGCGTTCGATGATCCTGCTGGTGGTCAAGAACGGCGAATGGAAGGTCGACGAGTGA
PROTEIN sequence
Length: 394
MFLKAVNKRPFRRVSMIAKLCAPVAMMLAATASQAQETIRIGGIFALSGPASFLGVPEERGFRMKIDEINKAGGLNGRKIEAVVYDTEGNTTKAAQQFRRLAESDNVIAVIGPSSSGESLTVGPIANELKVPTVTHAGTEKMTVPVTPWVFNTPPTDRVVAAHLLGVFKKRGITKIGLMTAADGFGQSGANVVKELAPQYGVQVARHEEFNRQDADITAQVLRVKDSDAQAMLIWSAFPAPTIILKNAAAVGYKKPIYNSFAAASKDLIVQGGANAEGTYVSSMRLLAPETLSADDPMRQIVQKIYADYKERYKEAPATFTAHSYDALLIIEAASKKIQGPITRQSLRDAMETVSVAGGNGLYRLSPKSHGPDPESRSMILLVVKNGEWKVDE*