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SCNpilot_expt_500_p_scaffold_3947_4

Organism: SCNPILOT_EXPT_1000_BF_Burkholderiales_68_66

partial RP 29 / 55 MC: 3 BSCG 30 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(2253..2807)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI00030B1128 similarity UNIREF
DB: UNIREF100
  • Identity: 59.8
  • Coverage: 184.0
  • Bit_score: 211
  • Evalue 8.80e-52
OmpA/MotB {ECO:0000313|EMBL:KIF80963.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.4
  • Coverage: 184.0
  • Bit_score: 218
  • Evalue 7.70e-54
pal; peptidoglycan-associated outer membrane lipoprotein; K03640 peptidoglycan-associated lipoprotein similarity KEGG
DB: KEGG
  • Identity: 58.5
  • Coverage: 183.0
  • Bit_score: 202
  • Evalue 1.30e-49

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Taxonomy

Herbaspirillum sp. TSA66 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 555
ATGAGACTCTCGATCCGATTCCTCCTGATGGCAGTGATGGCATCCTTCCTCGTCGCCTGCGGCTCCAGCGTCAAGCTGGAAGACGAGGCGGGCAAGGGACCGGCGCCGATCGAATCGCGCAACGGCGCGGCCACCAGCGGCGCGGCGGCCGGCGCCACCAGCGAACGCGGCGTGGCCGAGGTGCAGGCCGGCGCCACCGACGAGCTGAACAACCCGAACAGCCCGCTGGCCAAGCGCAGCATCTACTTCGACTTCGACAGCTTCGTGGTCAAGGACGAGTTCCGCCCGGTCATCGAGGCGCACGCACGCTACCTGGTGAGCCACAAGGATCGGCGCGTCGCGCTCCAGGGCAACACCGACGAGCGCGGCAGCCGCGAGTACAACCTCGCGCTCGGGCAGAAGCGCGCGGAAGCGGTCCGGCGCTCGCTGTCGGCGCTCGGCGTCGCCGAAGCGCAGATGGAGGCCGTCAGCTTCGGCGAGGAGCGCCCGCGCGCCACCGGCCAGGACGAAGCCTCCTACGCCGAGAACCGCCGCGTCGACGTGGTGTACCAGTGA
PROTEIN sequence
Length: 185
MRLSIRFLLMAVMASFLVACGSSVKLEDEAGKGPAPIESRNGAATSGAAAGATSERGVAEVQAGATDELNNPNSPLAKRSIYFDFDSFVVKDEFRPVIEAHARYLVSHKDRRVALQGNTDERGSREYNLALGQKRAEAVRRSLSALGVAEAQMEAVSFGEERPRATGQDEASYAENRRVDVVYQ*