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SCNpilot_expt_500_p_scaffold_39847_2

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN2_64_69

partial RP 13 / 55 BSCG 13 / 51 MC: 1 ASCG 4 / 38 MC: 1
Location: comp(490..861)

Top 3 Functional Annotations

Value Algorithm Source
phage transcriptional regulator AlpA id=12498574 bin=THIO_MID species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 124.0
  • Bit_score: 251
  • Evalue 3.90e-64
Phage transcriptional regulator, AlpA {ECO:0000313|EMBL:CBH97702.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.4
  • Coverage: 123.0
  • Bit_score: 222
  • Evalue 2.70e-55
phage transcriptional regulator AlpA similarity KEGG
DB: KEGG
  • Identity: 58.1
  • Coverage: 117.0
  • Bit_score: 137
  • Evalue 2.60e-30

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Taxonomy

mine drainage metagenome

Sequences

DNA sequence
Length: 372
ATGTACAAAGCAGATCGAAGTCTGGTGGCTGCGAGGCCAAACGACGACTCTGATACAAACGAACCGCACGACATGCAGCTACCACGACTGGTCGCGACAAATACCTTGCCGTTCAGACGCACGATCCGCCGTACCGAACTGCGACAGATCGTGCCGCTGGCCGATACCACGATCTACGACATGGAGCGCCGCGGAGAATTTCCGCGCCGGTTCAATCTGACCGCGCGCTGCGTGGTATGGGACTTGACGGAAGTAGAAGCCTGGCTCGACGCCCGTCGGCAAGCTTCCGACAGTGCGCAGTTGAAACGGGCGCCCTCACCGGACGTGCGCCAGCGAAAGCATCGTCCGGTCAAAGCAAAGCCTCTGTCGTGA
PROTEIN sequence
Length: 124
MYKADRSLVAARPNDDSDTNEPHDMQLPRLVATNTLPFRRTIRRTELRQIVPLADTTIYDMERRGEFPRRFNLTARCVVWDLTEVEAWLDARRQASDSAQLKRAPSPDVRQRKHRPVKAKPLS*